SimpleSearch - Line and FST details


Line specific information

 
Line ID 338F04
Vector Used pAC161
Line Availability only available from NASC (N432416)
Segregation Analysis 64:58:42
Confirmed for Hit At5g47640
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g47640

 
Sequence (A. th genome BLAST matches underlined)
>30-K016159-022-338-F04-8409
TGATCTGTAGATTCCNGGACATGAAGCATTTACAATTGATATATCCTGTATATGCATGTC
GACTCTATGGGATCGTTCGTATAGTGAGACCAGCANAGGGATCCTCACTACGTGGAGAAA
ACAGAGAAGATATGTGGGCGGTCGGGACACAGAGGGCACCTGCCACTCAACAACCCTTCG
GACAATTTTTCACTTCTTGTTTTCTCTGCTTATGAGAACCTCCGGATAGTGATACACCGG
TGGGGACCATACCGGGGGACACTTTACAATTAACACCTGCTCTTTTTACTATTTCAAAAA
CCCTTGGGAATCTAAAATCAGCCTTCCTTCTCCAGTTTTCCACGAATTGAATTCTATCTC
GAGGCACTGACGGTAATGATTTTAAAAAAGAGGAAAGTTTATATCTTTATTCCTATGCAC
CTTCTCAAATGGGGGATACCCACTGGGATTCCGGTGAAGGGCTGCCCCCCAACAAAAAAC
CGGAGGGGCCTCCTTGATCTCCAAAGAGAAGGACCCGTTCTTGCCGATGGCCCACTTCTG
CCGGATCATGGAGACAGCCTTTACCCGCCAACGCCAAGATCTCTAAAGATGCCAAAGAGA
CGATGCAGGAGTGTGTCTCCGAGTTCATCAGCTTCGTCACCGGAGAAGCATCTGATAAGT
GTCAGAAGGAGAAGAGGAAGACGATCAACGGAGACGATTTGCTCTGGGCTATGACTACTC
TATGGG
GenBank Accession BX285316 [GenBank]
Graphic View Graphic view of gene At5g47640
Predicted Position of Insertion Chr5:19309045 - go to primer design
BLAST e Value 2e-86
Hit Clone Code (BAC ID) MNJ7
Hit Gene Code At5g47640 [TAIR] [MIPS] [SIGnAL]
Gene Annotation nuclear factor Y, subunit B2
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 14.10.2014 10:23