SimpleSearch - Line and FST details
Line specific information
| Line ID | 350G12 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
| Note |
Gene hit At5g03580
| Sequence (A. th genome BLAST matches underlined) | >95-K016245-022-350-G12-8409 TATCCTGAAATTTCCCGGACATGAAGCCTTTCCATTGAATATATTCAATTGCTGGTATTT TCGGCACCTTTGTATTTTTGCTCTTCATATATATAAACTAACTCAACCAAAAACTTGAAA TGTTTTTACCTATTAACCTTCCGTCCATATGAAGCATGGCTCGGCCAGCACTATCCGCAC TTTCAAACTCAATGAAAGCAAATCCTCGCGACTCTCCTCTAAAATCTTTTGCTATGGGAT CCTCCCTATAGTGAGTAAGGGTGAAGATACTTGGATTCTTGGTGATCTAGTTGAGAAAAC ATTGACTTACCTCTTTATTTTAGGAATCTGATCACAAATGTTCACCACAGCTATGTGATC CTCCCTATAGTGAGAGGCTTCCGGATATTACCCGGGGATGAAAAGTCTCAACCGCCCTAT GCTCTGCTGAGACTGGATCTTTGATATTTTTGGAGAAGACAAGCGAGCCGTGCTCCACCA TGTAGACGAACATTGACATCTTGCCATTGAAACGAAAGAGACTGTGTATGAACTGTTCGC CAGACTTTACGGAGAGCACTGCTACGTCCCCCATTTGGATCTAATGACTCCATGGGTAAT TGCGCGACACACTCTGATACCTCTCTCATAAGGGAGGCTTGCCCCCCAGGGAAATTGGGA GACCCTCCAAGGGAACCCCCCCACATGGGAGGCTCCTACCAAACCAGGTTCGTCAAAAAG ATAAAACCCTTTTCCCCCAAAAACCCCTCCTTTTTAAAAAAACAAAAGTGGCCGCTGTTC AGAGGGAAAAAC |
| GenBank Accession | AL953396 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:907099 - go to primer design |
| BLAST e Value | 7e-89 |
| Hit Clone Code (BAC ID) | F12E4 |
| Hit Gene Code | At5g03580 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit T25K16
| Sequence (A. th genome BLAST matches underlined) | >95-K016249-022-350-G12-8409 TTTCCCGGACTGAAGCCATTTGCAATGTAGATTAGTACCTGTACTATTGTTATCTTCGTG TGCTATATGATATCGCTTTAGGATTGGTTCACACTTCACATGTAAATAACAAATGGGCGT AACCCATATTCATGCTTTAATATCATATACAGCCCAATTAATATTGATTCCTTTCATATT TTCAAACCCAGTTACAACTTGGGCTCATTACCACCAAAAAGTTTCATATGCATTTCCATT TTTATTTTTCCAATTTATCGAATGTATATGTAAAGAACACTTCTACTTAAAAATATATTT AACGTTACCATAAAACAAGATTACAAGTTAGTGACGTCATGTTATTGAACAGTCAGAAAC CAGTCAGAAACACTAACCAAGTCGAACACTCCACGACGAGATCGATTAATATACTACAAT TATACAAAAAGCTTTAATCAAATACTTCATTCTATTATATAAAACCGTGATGTCCTTTGA CCGACTTCTTTATGAGAAATTTCGTAGCATATTAAGGATGTCCAAACAATTTGGAGAAGT TATCGCCAACACGCAAAATATAGTGTAATTCATTTTAGGAAAGTGGAATGATTCCTATGG A |
| GenBank Accession | AL953397 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:81850 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T25K16 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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