SimpleSearch - Line and FST details
Line specific information
| Line ID | 352F03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N433759) |
| Segregation Analysis | 50:44:42 |
| Confirmed for Hit | At3g13920 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3885, 4125, 7203, 9878 |
Gene hit At4g33410
| Sequence (A. th genome BLAST matches underlined) | >22-K016360-022-352-F03-8409 TCGACATTGAGTCATTGAGTGTAATACCTGCTTAATTTTGGATTTCTGGGATTGTTATTA GAATGTAGAGCACACTTGGATAACTGAGTTTCCTTAAGCTGTCAATCTGGGTATAAACAA TTTTAAATTTACCCTTTTTCTTAAAGAACTCATCTTTAGCTTGAGGTCTGAATTTTTGAG CCGAACATGTACTTAGTATCTTATTAACCATGTCTTGAGAACTATTATCTTTCTTGATGT CCCTTTGTTCTGAACAGATCTCAAGAACGTTAATCTTTTTGGTTATACTGGCGGCTTACA CTGAGGTTTGATGCTGTGAGTTTTTATTTTACCGGCTCGCATCTGATGTAAACTGATTGC AACTCCTACAGGGATTTCGCATATTTGCTTTTATGCGTACGACGCTGTGGGGGATGTTTA TATAATCGGACATAACTCTTTTCTTATCATGGAGACTCTG |
| GenBank Accession | AL953609 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16081198 - go to primer design |
| BLAST e Value | 7e-129 |
| Hit Clone Code (BAC ID) | F17M5 |
| Hit Gene Code | At4g33410 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SIGNAL PEPTIDE PEPTIDASE-LIKE 1 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At3g13920
| Sequence (A. th genome BLAST matches underlined) | >22-K016361-022-352-F03-8409 TGTCCTGAAATTTCCCGGACTGAAGCCATTTACATTGATATTAAGGAAGTATCTCGTCCG CGCGCATATAGTGTAGTCGAAGACTCCATGGAATACTCGCGTATTGTAAGAAACTCTATG GGATCCTCCCCTATTATGAGACTGGTGGGGTGACGGACCTATGGGATCCTCCCTATAGTG AGAAGTGAGATTCAAGTTAAACTATAACGAGAATGGAATTGAAACACTGAGAAATATTTG CATACCTGGTCCTTGAAACCACGGGAGAGCATTTCATCAGCTTCATCAAGAACAAACATC TTGATGTTGACAGCACGAAGAGACTGCCTCTTCAACATGTCAAAGACACGCCCTGGAGTT CCAACAACAACATGGACACCAGCTTGGAGGATGCGCTGATCCTCACGGACACTGGTTCCA CCAACACAGGCGTGAACCTTGACACCAAGGTAATCACCAAGGGCCCTCATGACCTTCTCA ATTTGCTGAGCAAGCTCACTATGGGATCCCCCCAATAGCGAGAGATCTTCTTTGAAGAGC TCCGGATTCAAATCCGAGTCGGGTCAATACCGGCGGGTCGTTCGGTAATCTTGAGCCTTT CAGAGCTTCACGTCATCTTCCAGAAACTCAAGTTCCTACTATGGG |
| GenBank Accession | AL953610 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:4593165 - go to primer design |
| BLAST e Value | 2e-172 |
| Hit Clone Code (BAC ID) | MDC16 |
| Hit Gene Code | At3g13920 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | eukaryotic translation initiation factor 4A1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |