SimpleSearch - Line and FST details
Line specific information
Line ID | 382E01 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N436625) |
Segregation Analysis | 100:96:83 |
Confirmed for Hit | At1g48000 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F25P12
Sequence (A. th genome BLAST matches underlined) | >05-K017269-022-382-E01-8409 ATTTCCCGGACTGAAGCCTTTACATTGAATATATTCTATGGGATCCTCCCTATGGTGAGA CATGTAGATTTACATGTAGTTTTTCGTGTCACCTAATTGATTGTAGTCGACTATGCAAAT TTTTCTCTTTTCGATTGGGTTTAGATTACTCATACCGCCCTAAGAAATCGACTAAAGAGT TGATTTTCGAAAAACTTTTATCGATACCTATGGCTGGTTTGAGGCTTATTAGTTTCAACG AGACTTGTGATGATGGTTAATGTTTGGAATGTTTAAACTTTGAACTTATGTTTATTTAGT TTTGAAGAGATTTATGATGATAAAAACAATGATCTATTTCATAAATTATAATTCTAAAAA ATTTCATTCAAAAGATTTCTCTAAATTTGATTTTTTTTTTGACCGGGCATGTTAATTAAT TAAAGGGAGAAATATATTGTACTTGAACTTGAACCTTGAGATGGCGGTTGAAATACAATT GTTTCAAACTTTATTTCTTTTGGTTATAAGTTGTTTATGGATTTTTTCTTTATTCTTCCG AAAAATTTTTTTTTTTCCTTTTAAA |
GenBank Accession | BX285387 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:21316371 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | F25P12 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Gene hit At1g48000
Sequence (A. th genome BLAST matches underlined) | >05-K017265-022-382-E01-8409 TGATCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATGGATGACATAACGAGAC ATCCCAATCATTATACCACGCATGTTTTCCTTTTCTCATACCGTCATACGAGATGAGCCA TACCTATGTGAATGTGATTATATCGAGCTATGAGAATACTTTTCTTATGGCTGTGACTTC TCCATGACGGCATAATTTAAATTCCTCTGTAGAATTGGTAAAGTAAGAAAGAACAAGTTG ACATATTCATAGTTCATTATTATCATTAAAAGTGTACTTTCGTATGAAACAGTTTGGTCG GTCCAAATTTATTTATTTTTTCCTTTGGAGTTCTTTTCATATTAGCCTTTTGAGTGTGGA ACTCAAACACCTTTCCCAACCATCCAATTCCATACAGCCTCATGGAATTGTTATCTTTAT TGATTTGGGAAATTGCACTATGGGATCCCCCTAATAGTGAG |
GenBank Accession | CR770370 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:17705820 - go to primer design |
BLAST e Value | 7e-160 |
Hit Clone Code (BAC ID) | T2J15 |
Hit Gene Code | At1g48000 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | myb domain protein 112 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |