SimpleSearch - Line and FST details


Line specific information

 
Line ID 401F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N438469)
Segregation Analysis 100:100:87
Confirmed for Hit At1g05570
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g05570

 
Sequence (A. th genome BLAST matches underlined) 
>70-K018290-022-401-F09-8409
TGATCTGTAAATTTCCCGGACATGAAGCCTTATATCAATTGAAACTCCGGTTTTTCTCAG
ACCATAAAGAATTGGTTTGGGGGACACAGCCATAATTCACCTTCTCTTTTCATAGTGGCA
ATTCTTATCTACTTATCCCCGAACATGCTTTCTGCGTTGCTGTTTTTGTTTCCATTCATT
CGGCGCTATCTTGAAAGGTCTGACTATAAGATAATGATGCTGATGATGTGGTGGTCTCAG
GTAGTTTATTCATGTGCTTATATCTTGAAAAATGCTATGGGATC
GenBank Accession BX287461 [GenBank]
Graphic View Graphic view of gene At1g05570
Predicted Position of Insertion Chr1:1655315 - go to primer design
BLAST e Value 7e-129
Hit Clone Code (BAC ID) F3F20
Hit Gene Code At1g05570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation callose synthase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g45740

 
Sequence (A. th genome BLAST matches underlined) 
>70-K018291-022-401-F09-8409
TACTGCGACTCTGCTCGGTTCGAGAATGGGTTGTATCGGATCTGCTCAGGCCAGAAATGA
AGGCAGACGTCAGTGGAATCGATACTCTCTGTAACCTTTAATTCCGCACTCCGCTTGTCT
CGCTGAATTCGTTCTCAGAATTTGGGCTACAATGTATACTTGTGTTGTCATGCTTTGATT
CTCGGTGACAGTCCTAGACTACCCTGCTTCGGTTGCGATGGATGGCCGAACTGACGGCTG
AGCAGATCACCTTCTATGATGGAAGTAGAGATCGTCGCTTTCATCGCTGCAATAAAATGC
TCCNAATGGAAGAGTCNACACNGAAGACTGCTTTCGCGCAGGGAACTGCCTACATACCGT
GGGCAGGGGATTAAGCCTTATCGTACTTCGATTG
GenBank Accession BX287462 [GenBank]
Graphic View Graphic view of gene At5g45740
Predicted Position of Insertion Chr5:18558330 - go to primer design
BLAST e Value 1e-62
Hit Clone Code (BAC ID) MRA19
Hit Gene Code At5g45740 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ubiquitin domain-containing protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37