SimpleSearch - Line and FST details


Line specific information

 
Line ID 414C11
Vector Used pAC161
Line Availability available as T3 set from NASC (N439683)
Segregation Analysis 50:50:49
Confirmed for Hit At4g15735
Parent of DUPLO pair none
Parent of pair(s) 65225

Gene hit F3L12

 
Sequence (A. th genome BLAST matches underlined) 
>83-K026073-022-414-C11-8409
AGCCATTTACGATTGAATATATCCTGATCCTCCCTACCGGGAGGACGCCTGCTTCATGTT
CGCAAGCCGAGGTTAACCCGACCTCCCTAGAGCGAGATGCATACGATATCACTTAACCAT
TGAGATATGCGATCCTTCCCCCAAAGAGAGAGAACGCCGGCGCTTCTCATTGATCCTCAT
GGGACTTTTCTCTTCTTCCCTCAAATGGCGTTAGCAAGAAATCAATGTATCCTAGCCATC
CACCCACGCAACGTACACGCACACATCTCGATCTTGAAGAACTAGAACTCGCTCAACACA
CCCTACTATCGATTTGTGTCGCTCAAATCGAGATTCTTCTTCTATGGTATGGGA
GenBank Accession FR809854 [GenBank]
Graphic View Graphic view of sequence FR809854 of line 414C11
Predicted Position of Insertion Chr2:1365819 - go to primer design
BLAST e Value 0.014
Hit Clone Code (BAC ID) F3L12
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit FR809854 [GenBank]

Gene hit At4g15735

 
Sequence (A. th genome BLAST matches underlined) 
>83-K018043-022-414-C11-8409
ATTTCCCGGACTGAAGCCATTTTTGAGCGATTGTACCCCTCAGCCCAATAACAAGCGTCT
TTGTGAATGTTCAGTTATTTGCACCGATTGTTGTGTAAAAAATTAACACCTACTAATATG
TTGTTATCTACTTAATTTTCAGCACAATTATAATAAAAATTTTGTCCCCAATAATACCCT
ATGGGATCCTCCCTATAGTGAGAGNCCANATGGACCATCATTCTCATTGCTGTTCCATGT
AGAAAACGCGGACATCCGGCCCTTTTTGAGCGATTGTACCCCTTTGTCGAATAACAAGCG
ACTACGAGCCTGTCCAGTTATTGGCGCCGGCTGTAGAGAAATAAATCAACTCCGACAAAT
ATGATGTCAACGACTCAACTTTCAGCGC
GenBank Accession BX288434 [GenBank]
Graphic View Graphic view of gene At4g15735
Predicted Position of Insertion Chr4:8963436 - go to primer design
BLAST e Value 2e-82
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g15735 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SCR-like 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37