SimpleSearch - Line and FST details
Line specific information
Line ID | 418H02 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N440118) |
Segregation Analysis | 50:50:25 |
Confirmed for Hit | At1g60490 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g60490
Sequence (A. th genome BLAST matches underlined) | >16-K018099-022-418-H02-8409 TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGCCGCCGATGTT CAAAACTACAGAAATCAATGACCACAAACAGATGTGAGCTTCCATGTTTGGTGCTTTCTT GCTCCTTAATCGTATCCAAGGATTTCAACATAAGTCGATCCAGCCAATCTATGCTTTGAA TCTGCCCCCTCTCATACTTATTCATGAGCTTCTCTAAACGCTCTATGGGATCCTCNCCTA TAGTGAGAANANNGGAACCNCCCNATACCGAGTTTTTTTCAATTTAAAAATGCAAATGGC CGCAGAATGATTATACGCNNNGGGAGCCTCCCGATAGNGAGGGNNGGNGNNNNNCNNTTT TTTCGGNNCGCCCCCCCCCCCCTNCCGGCCCGCCCGCGCGGGTTTTCAGGGCGCCCGGCG GCGCCAAAAGAAAAAGGGAGGGGGGGGGCGGGCNGGGGCCGGCGCATCTCTTGGGCGCGC TTGGCGGGACGCGCAGTAGACCAAGGGTGCGGTAAGGGCAGCGAAGCGGGGAGGGGGGGG CGGCGGAAGCGAACACAAGAGGGGGGGAGGAGAAGGGGGGGGGGAGGCGGGAGGGAAGGG GGGGGCGTGGCGGGAGAAAGGTGAAGACGGGCANGAAGCGNGAGATCAGGGCGAGGGGCG GCGGAACAACGCACGACCTGGGAGGTCGAGGNACAGATCCAGCACGCACCGGCCACCACC CGACCGGCGGCGCGCAAGATAAAAGAGAGAGGCGCGNGAGAGGAGGTGGAGAGAAAGGGC AGTGAAGCGGGGAGCAGCGAGGACAGACGCGACACGAAGGAGCGGGATAAGCGGGGNNGG ACAGGTGCGGGGTAGCCACGCAAGTGAAAAC |
GenBank Accession | BX288673 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:22289126 - go to primer design |
BLAST e Value | 4e-93 |
Hit Clone Code (BAC ID) | F8A5 |
Hit Gene Code | At1g60490 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | vacuolar protein sorting 34 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |