SimpleSearch - Line and FST details
Line specific information
Line ID | 440H11 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N442239) |
Segregation Analysis | 50:47:46 |
Confirmed for Hit | At4g14540 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g14540
Sequence (A. th genome BLAST matches underlined) | >88-K018208-022-440-H11-8409 TATCCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCGGATTATTATCCTGA TGGCTCGACCTTATGGCTGCACGATCTCAAGAGGAGGACTCGGACTACGATTCTGGAGGA CACAAAGACGGTGGAAATGCTTCCACACGAGAGCCAGATAGGTTTCTACCGATCGCTAAC GTTAGCAGGATCATGAAGAAAGCACTTCCTGCGAACGCAAAAATCTCTTAGGATGCTAAA GAAACGGTTCAAGAGTGTGAATCGGAATTCATAACTTTCATCACCGGTGAGGCTTCTGAC AAGTGTCAGAGAGAGAAGAGGAAGACTATCAACGGTGACGATCTTCTTTGGGCGATTACT ACTCTATGGGATCCTCCCTTATAGTGAGATCTTTAGCGGGAAAATCACGGGTTTATGTTT TTTGATGGAAAAATTACGAGTTCACGTCTTCTCAATTATATCTCTGTATATTTGAGAAAT TTGGAAAAATATTAATTTTATTACATCGGGATTAGATGTGCTGGTTAAACTTAAATTGGT ATTGGCTTAAAGATTTTTAGCTGGATTAATTCAATTTTACAAAACTTGATGGGATAATTG GGGTAAACCCATTGAAACCATTAAACATTTACAACTCAACCTCATTTTTACTCAACAAAC CAATTTGATCCAAT |
GenBank Accession | BX290891 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:8344630 - go to primer design |
BLAST e Value | 2e-123 |
Hit Clone Code (BAC ID) | FCAALL |
Hit Gene Code | At4g14540 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | nuclear factor Y, subunit B3 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |