SimpleSearch - Line and FST details
Line specific information
Line ID | 451G10 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N443282) |
Segregation Analysis | 50:42:37 |
Confirmed for Hit | At5g06710 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g01010
Sequence (A. th genome BLAST matches underlined) | >79-K018834-022-451-G10-8409 TATGGGATGCCTCCCTATACTCATGACTTAAATGGTGTGATTATATACGTACACGCTATG GGATCCTCCCTATACTGAGAGCCTCTAGCGACAGAGACTGAAGACGATGCCGACTCTCTG TGACCAACAAACGCCACATTTACCGCCTCGCAGAACCCAACACCCTTCTCGTACGCAAAT GCCAACAAGGCAGAGGGAGTATTGATCTTCGGGGTCCTCTCCACGATGGATAACTGCTCC TTTTCACTGCCAACGAGAAGCCCCTCCCTAAGGTGTAAACCATACTCAACAATTCCTTCA AATTAAGTACGAAACACAGGCCCCGGAACTCATCATCGAGCGTAACATCGCCCGTGAATT AACTGAGAAGGATAGGTGGTAGGTAGTTCGATGCCCGAGCATGGAGCCTAC |
GenBank Accession | BX292165 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:3718 - go to primer design |
BLAST e Value | 2e-67 |
Hit Clone Code (BAC ID) | F23H14 |
Hit Gene Code | At2g01010 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | rRNA |
Insertion Classification | TS2TE |
Confirmation Status | unknown |
Gene hit At5g06710
Sequence (A. th genome BLAST matches underlined) | >79-K018836-022-451-G10-8409 TGATCTGANATTTCCCGGACATGAAGCCATTTACTGCATGCATGTCGAGCCTATGGGATG CTCGCGATGCTGAGAGTGTCATGGGGGATCTACAGAGGACTAAACCCGTTGTTCGTCATA TGTTTTGGCTCTGGGCGCCGGTTTCTTCTTCGCATCCTCTACCGACGGATACTATGAGGA TGACAACGATCTGTGAGCACCTTAAGCAACATCTATGGCCATGCAGAACCCAAGATCCTT CTCGGAGAGTATATGTCCACGATACAGAGGGATTATTAATCTTCGAGTTCTTCTCCATAA AACACAACTGTTGCTTACTATTGTCGCCTATGGGATCTGNCTTATAGTGAGAGACTTGGC TTCGCCTCCTCAGAAATTGAAACCTATAAGGTGTGGCGTTAAGCTTCCGTCGTCGTCGGA GGATCGACATCCTCTTGATATTCTCGCCGGAACCCTATGGGATCTCCCCTAATAGTGAGA ANCNNANAANANTATGGGATCCTCCCTATAGTGA |
GenBank Accession | BX292166 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:2069995 - go to primer design |
BLAST e Value | 4e-72 |
Hit Clone Code (BAC ID) | MPH15 |
Hit Gene Code | At5g06710 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | homeobox leucine zipper protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |