SimpleSearch - Line and FST details
Line specific information
| Line ID | 471G11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N445203) |
| Segregation Analysis | 116:36:18 |
| Confirmed for Hit | At2g34480 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g34480
| Sequence (A. th genome BLAST matches underlined) | >87-K019878-022-471-G11-8409 ATTTCCGGACTGAAGCCTTTACAATTGAAAACCAAAAATATCCGATAAAATCCAAAACGG GAGAGAGCACAGCTTCAACATCGATTCCACCCCAAAAAAGAGTCAATCAGAGACGTTTTA CATGAACAAGTTGGGCTTGTTGGCCTTGTAAGTCGTCTTCAGCTTCCTGCTTGGTGGTCT AACCTTGCGGAACACCAATGGGAACTTGATCTTGCTGTTGTGGAACTGTTTAGTGCTCTC TCTCTTGCACAGCTTGGCTGGGACAGTGGCTGTCTTGATGATCTGAATGCAAGGGAATCT GACACGGTGACGGGATGCCATCTCAGTGTACATCTGCTCAACAGCTCCGTTAAGAGTGGT GTCACGGTACTCCTTGTACATGTTGTGGTACCCAGTTCTACTCTGGTACCTCAACCAAAT ACCGAAGTTCTTGATCGTTGTTGGGTTCTTCTCATAGATCTGTGCAAACAATTTGGTAAT AGATTACATTAGTCAAGAGAGGGGCCAAGGAGCAATCAAACAATATAAACTCATGATAAA AACGTGATATGGTTTCAATTTCGATTCAATAGCAAGTCGAGAGAATCAAGTAAGAGACTT TGGTGAATCTAAGTTTTCTCATTTGATGACAGACACAAATGAAAAGATTAACCTATGACC CCCCCCC |
| GenBank Accession | BX531076 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:14532822 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F13P17 |
| Hit Gene Code | At2g34480 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ribosomal protein L18ae/LX family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F16F14
| Sequence (A. th genome BLAST matches underlined) | >87-K019883-022-471-G11-8409 TGGGATCCTCCCTATAGTGACGATCTCTGGAATCAGCCCTATTCTGAGATATGGCATCCT GTCTATACCGTTATGCCTCAACTAAACTATTTTATTTACAGAATACTTCTCATAGTGAGA CCGACCGCTCACCTCTCAAAGTTGTGAATATGGAAAAGTAATCTTGTCCTTGATGAATGA TCGTAACCACAGTTCTCTTCTAAATATGATTCTTAGGTTATTCGGTTGACTATCAACACT GTAACGTTTAACGATTTGTTGAAACTTACTTTAGAAAAGTTGCCCATGTCATTTTTCTAT GCAATGTTTTGGCAAATTATTCGATTAAATAAATTAGTTATCAGAGCTTTTGGTTATCTC ATAAATTACTCAGATGACAAAAAAAAAAAATGGAATTTATTTTGTTTAAAAAAAAAAAAA AAATTTCCCCAAAGGGGGAAAAAAAGGGGTTCCCCAAGGGGACCAGGGGCTGAAATTTTC CTGCCCAAAGGGGAAAAGGGGGTTGGAAATTTTTTTGAAAATTCCCCGGAGTTAAAGGGG GAAAAT |
| GenBank Accession | BX531077 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:7091702 - go to primer design |
| BLAST e Value | 2e-113 |
| Hit Clone Code (BAC ID) | F16F14 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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