SimpleSearch - Line and FST details


Line specific information

 
Line ID 472C02
Vector Used pAC161
Line Availability only available from NASC (N445242)
Segregation Analysis 50:16:10
Confirmed for Hit At1g69640
Parent of DUPLO pair none
Parent of pair(s) 149

Gene hit At1g69640

 
Sequence (A. th genome BLAST matches underlined)
>11-K019884-022-472-C02-8409
ATCGTCTATACTTTTGATGAGATTTTTATTGCCTCATTCGCTAATAGAAACTCGTACTTA
CCGAGTTTGCCTGTGATTACTGTCTACCTGGCTGGATAGGTTGCTTTGTGCCTCAAGATT
AGGATCTGACGACTTTGATACGACGCCTGATAAATGTGATCTTATGTGACGAATGAATTG
AATTCATCTGTGCTATCGCGAATTCGTCCCGTACTGTGAGAATTCTGGGATTTATGTAGC
GCTCTCCTCTTTAGAGAGTTATAGATTGCATTCAAAGGTTGAAGAAGAAGAGAAGAATCT
TGTATCGAAATCTTCTGTTGTGAAAGGTGTTCTTGTTCAACAGGTTGTTCAAGCTGTTGT
CGCTATCCTTTTGTTCACGGTACCGTTTTTCTCTTTTCCCATTTTTGAGTTGTTTTGCTT
TTGTGAAATTGAAGTGAAAAGTTAGGTAAAACATATTGGGGAATTTTGATATCTGACGCT
GACTTTTTATGTGTGGAATTGGATGGTTAAGATTTTTGTTTTTAAAAAGGTTAACTTTTT
GGGTTGATGTTGTCTTTCGACCCATAAAGAGAAATGGGTTATGTATTAATGATCTTAAAG
TTGGATCATATATTGACTGTTCTAACAATAGTTAAGAGCTTTAGAGGAAAGTATCAATAG
GGATTGTTCTGTGATTTGGCAATAGGGTTTAGACTTGGCAGACTTATTGGCTGCTCTA
GenBank Accession BX531119 [GenBank]
Graphic View Graphic view of gene At1g69640
Predicted Position of Insertion Chr1:26195673 - go to primer design
BLAST e Value 1e-157
Hit Clone Code (BAC ID) F24J1
Hit Gene Code At1g69640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sphingoid base hydroxylase 1
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 07.07.2016 14:03