SimpleSearch - Line and FST details
Line specific information
Line ID | 483D04 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N446312) |
Segregation Analysis | 100:59:42 |
Confirmed for Hit | At1g63650 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g63650
Sequence (A. th genome BLAST matches underlined) | >28-K019729-022-483-D04-8409 ATGATCATTTACCATTGATAGATACTCATTTTATTGGAAATAAGTTTTTACTTCATTTGC ATAATTGCATTATACATTTGCTATTCAAAGAAAGTAGTAGAAAACTTTTGTTCCCATTAA GATAAAGATTTTGAGATACAAAACATAAAGGGTATTTCCGTCTTTCTAATGTAGAATCCC CGGAGGAGCGTTATCCAATGGAGAACCAATATGGCTTTGTAACGCTGAAACCGCCGATAG CAAAGTCTTCACTCGTTCTCTTCTATGGGATCCCCCCTATAGTGAGATGTAAAAACGATA TCCTTCTTAAAAGAAATTTTTCTGAAAGATAGGTTTTTGTTTTTAAAAAAGGTGAAATGA AAGGATTATGAGGAAGAGACGGAATTACCCTTCCCCGATGTTGAAGACGAAAGACATGCT TACTAAGTAGTACCACTCGGTGTCAGTGAGGTCCTCCCGAGAAAGAGCGGGGGGGGAAGC TCGTCTATGGGACCCTCCCTATAGGGGGGGCGGGGCCGGGCGCGCCCCGAGAACCATCGC GCGATACGCCGCCGGGAGTCACCCCCGGAGGCCGCGTTAACGAGCCCCGGCGTACTCGGC CCCGTAAGTGGGGACTATAGAGTGGCACTACAGCAGCGAAATCCCGTTTGAGGTACAAAG ACCCCTACCGAAGAGGAGAGAGAAAGA |
GenBank Accession | BX531737 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:23600798 - go to primer design |
BLAST e Value | 4e-127 |
Hit Clone Code (BAC ID) | F24D7 |
Hit Gene Code | At1g63650 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |