SimpleSearch - Line and FST details


Line specific information

 
Line ID 491F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N447112)
Segregation Analysis 50:38:28
Confirmed for Hit At5g45840
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g45840

 
Sequence (A. th genome BLAST matches underlined) 
>94-K019640-022-491-F12-8409
GCGAGTCTTCGATGGACCCATACTCTTACACGGGCCTATGGCAGAAGACTGAATATAGCG
GCTACTATTATCAGCATCGCTACGAGAGCAGCAACACCGATCGCAACAGACACATCACAA
ACGTCCTGAGAGCGCACTTTCGATTTTTCTGCGATTTCCTCGGAGGATGACTATGGGATC
CTCCCTATAGTGAGANACNATGATCCGGGCTGCTCCGTACGTACGCCAATGTGGAAACAC
TAGTCGGATCACCGTTTAGTAACACAGAGGACGCTTTAATCGCAAGATTGATCCGGAGAG
GGCCCAAATCACTGGGGGAGTGGGGAGGCAGATGCATGCTTTGTATCGAGATGTGCACAT
CAGGGGAAGGAAATACGGAGTACTTGGCGAGGGCTCATTCTGGAAAGATGTTGAAGCCCT
ATGGGAGCCTCACTATAAGGAGAGCTGGAGAGATCCTTCTCATGGTCACGGCGGGAAGGC
GGAATAAACCTTCGACGAAGAGAGGCGGACAAAAATAACGAAGGAGGCATAGATTGTAGC
GAACCGGGAAGATAGTTACGAATATCAAGCCCATACCTAGCCCCCCGACGCATAGGGGAT
ACCGCTTGAGAACCCTCCTCCATAGTAGCACAGCAAGAATAATTGGCTGGTACCACGTGA
GAGCAGAGCCTGTTGAGTGTCGGTAACCCACGTACCTTATTTACATTATAG
GenBank Accession BX532467 [GenBank]
Graphic View Graphic view of gene At5g45840
Predicted Position of Insertion Chr5:18595478 - go to primer design
BLAST e Value 7e-15
Hit Clone Code (BAC ID) K15I22
Hit Gene Code At5g45840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX532467 [GenBank]


Last Updated on 10.06.2021 13:37