SimpleSearch - Line and FST details
Line specific information
Line ID | 519H04 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N449816) |
Segregation Analysis | 50:39:27 |
Confirmed for Hit | At4g02200 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g02200
Sequence (A. th genome BLAST matches underlined) | >32-K020046-022-519-H04-8409 GCTATTTTGAGGGTTTGATTCGTCGAAGAAATATCGATTAGAAGAACTTGCCAAGTATCA GTCGGGTTAGTGTAAAGATCCATTCTTTTTCCCAATTGCATTTAGCTTTGTTTTAGGGTT TATGCTTTATATGCAGGTGGTTTTAATTTCTTTATCAAATTTCAATTCTTTTGGCCCTTA AGGCCTATGGGATCCTCCCCTATAGTGAGANNNNNNNNNNNNNNNNNNNNNCNNCGCCNN CGCNCGCCCNCCCTTTTTTTTTTCCCCCCTCCCCTTTCCCGTTTTCCCTTTCCTCGGCGG GTGTTGTCCCGCCGCCCCCCTTTCTCTTCCGGCCCGCGCTCGCCTCGGCGGCTCGCCGTT GCTGCGGTGTTGGCGCTCGGTCGCGCCTTGTGCGCCCGCGTTTTCCTTTCTTTTCTCGCC TGTTTTCCGCCCGTTGCCGCGCCCGGTCTTCGCGTGTTCCGCTCCGTTTTGCGCGCCGGT TTGTCCTTCCCGCTCAGTGTCGGGTAGCGCTTTCTACGTTTGATTTCCCGCGCCTTATTC CCACCCGCACGCCAGTAACTCGTAATCCGCACGCGAGTTGCTGATTTTTCCCCGTCCCGC TCCAATTGAGCATTCCATTCGCCACGCCGCTGTGCCCTGCCGCGGTATTTGTTCACCCCG ATTCATGATCCCCCACCGCACCCCTTATCCCTGTTTTACTTGCCTTTTATAG |
GenBank Accession | BX535652 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:972740 - go to primer design |
BLAST e Value | 1e-93 |
Hit Clone Code (BAC ID) | T10M13 |
Hit Gene Code | At4g02200 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Drought-responsive family protein |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | BX535652 [GenBank] |
Last Updated on 10.06.2021 13:37 |