Line specific information

Line ID 544F04
Vector Used pAC161
Line Availability only available from NASC (N452192)
Segregation Analysis 50:42:30
Confirmed for Hit At2g42200

Genome hit F1O11

Sequence (A. th genome BLAST matches underlined) 
>30-K020612-022-544-F04-8409
CCATTTACATTGAGTAACTCATTTATTTAAAAAGTGGCCGGCCGGGACCTCTATCAACAC
ATTTATGTTAGACCAATTTTTTGGTTGAATACTTAAAACCATTCTTTTCAAATGTGACAT
CACAATACGATATATCAACATCCGCTAAAACTGAAATAACACTTTTTCTTTTTTAGAGTA
TACATAACACTGAAATTGAAATTGAAAGCTANNNNNNNNNNNNNNNNNNNNNAGCTATGG
GATCCTCCCTATACTGAGATATATTAAATTC
GenBank Accession BX547559 [GenBank]
Graphic View Graphic view of sequence BX547559 of line 544F04
T-DNA Border not detected
BLAST e Value 8e-83
Hit Clone Code (BAC ID) F1O11
Hit Gene Code  
Gene Annotation  
Insertion Classification  
Confirmation Status unknown
Other FSTs Supporting this Hit BX572252

Genome hit T23K23

Sequence (A. th genome BLAST matches underlined) 
>30-K022299-022-544-F04-8409
CACCTATTGGCATACTATGAGAGTAATAGAGTTAAGTGTAGTCCTACGATTTACAGAAGT
CCAGATCTANNNNNNNNNNNNNNNNNNNNNACGAACCCTCCACTGGTTGAGGATGGCTCG
GTGCGACCCTCTCTCCTGTCCGACGGAGTG
GenBank Accession BX650249 [GenBank]
Graphic View Graphic view of sequence BX650249 of line 544F04
T-DNA Border 33 base(s) before start of sequence
BLAST e Value 3e-25
Hit Clone Code (BAC ID) T23K23
Hit Gene Code  
Gene Annotation  
Insertion Classification  
Confirmation Status unknown

Gene hit At2g42200

Sequence (A. th genome BLAST matches underlined) 
>30-K022309-022-544-F04-8409
AAATGTTGATGGATATGCAGTGCGTTCACCCCATCTACTTGGATATATTCATGGTCATTT
GGATATTCGTGATCATACGATTTCCCCACCTCCGTATTCGTGGTATATCTTCTGGACTGA
GATGAACCCTCCACTGAAAGAGGATGACTCAGTGAAATCC
GenBank Accession BX650250 [GenBank]
Graphic View Graphic view of gene At2g42200
T-DNA Border 0 base(s) before start of sequence
BLAST e Value 7e-08
Hit Clone Code (BAC ID) T24P15
Hit Gene Code At2g42200 [TAIR] [MIPS] [SIGnAL]
Gene Annotation squamosa promoter-binding protein-like 9 (SPL9)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences