SimpleSearch - Line and FST details


Line specific information

 
Line ID 576G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N455275)
Segregation Analysis 50:36:33
Confirmed for Hit At1g08160
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g08160

 
Sequence (A. th genome BLAST matches underlined) 
>23-K021197-022-576-G03-8409
CTCCAAATCGAATATATCCCGGAAGAGACTTAAGGGCTGAACTTAAGTCTATGAGATCGT
GCATACATAGAGACTTAAGGACATCGCAGCTTTGTGTCCCACAATGTGGCACTGTCTAAG
TTCAATGCCAGGGACTTAAGGGCTGAAAAATCAAAAGGGACGATCGAAATGGAAGTGTAT
ATAACGGCTATGGGATCCTCCCTATAGTGAGACTAATGGATCCTCCCTAAAATCGGATTA
CGAGATGCCCACATTCCCGTCCAAAAGGGGGCTTAGAAGAAAAAATGAAAGATCATTTCG
ATGAAATGACCAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAAAAAATTATTCT
AATTCGGAAATCTTTATTTCGACGTGACTACTTTAACGTCCAATTGGGGGCTGACATGAA
AAAGTACGATACCAATGCCTTGATTTCGCCATTCCCAAATACCCATTTCATCTTCAGATT
GGTCTAAAATTATGCGAAAATATACACTCATATACATAAATACTGACAT
GenBank Accession BX653151 [GenBank]
Graphic View Graphic view of gene At1g08160
Predicted Position of Insertion Chr1:2559973 - go to primer design
BLAST e Value 4e-49
Hit Clone Code (BAC ID) T6D22
Hit Gene Code At1g08160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37