SimpleSearch - Line and FST details


Line specific information

 
Line ID 626D12
Vector Used pAC161
Line Availability only available from NASC (N460048)
Segregation Analysis 50:46:34
Confirmed for Hit MVI11
Parent of DUPLO pair none
Parent of pair(s) none
Note Although the line exists, the insertion in At5g11510 can not be ordered because the confirmation of this insertion failed.

Gene hit At5g11510

 
Sequence (A. th genome BLAST matches underlined)
>92-K022016-022-626-D12-8409
AAAAACTATAGTTCAGTCAAGAAGAAACTTGATTCCTACATGTCAGTCTGGCCTTTTGGA
TCAGTACCAAGCCATGCCCCTATGGGATCCTCCCTATAGTGAGTCCTATTACTCACCCGT
TTGGACGTGAATGTAGACACGCGTGATGCCCAACCTATGGGATCCTCCCTATAGTGAGAC
TATGGAATCCTCCCTATAGTGGGCTACATTGAAATGCTAATTATTATTCGTACAAGCATG
AAAACTCACCATTTGATCTCCCCTATAATAAGACTTAAAACGCCTGCAGGCAAAAACCGA
AGTAAAATAATCAGCTAAACCCATATACTATGGGATCCTCCCTATAATGA
GenBank Accession BX657788 [GenBank]
Graphic View Graphic view of gene At5g11510
Predicted Position of Insertion Chr5:3681762 - go to primer design
BLAST e Value 2e-26
Hit Clone Code (BAC ID) F15N18
Hit Gene Code At5g11510 [TAIR] [MIPS] [SIGnAL]
Gene Annotation myb domain protein 3r-4
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 561F08

Gene hit MVI11

 
Sequence (A. th genome BLAST matches underlined)
>92-K022317-022-626-D12-8409
GATCAGTTATAAATTATATTGATCAGATTTAAACAAATTTTAAATTATATATAAGTTTTT
TCTTACACACAAATTAAACCTTTGATCAGTACTATGGGATCCTCCCTATAGTGAGACGTA
GGGCTCCGCGGGTTGGGGGGGATGGGAGACTCGCGGTGGGGGGGGCGCGGGAGTGAGCGG
GGGGGGGGGGAGGGTCCCACGGGCGAGAGG
GenBank Accession BX657789 [GenBank]
Graphic View Graphic view of sequence BX657789 of line 626D12
Predicted Position of Insertion Chr3:6632348 - go to primer design
BLAST e Value 8e-38
Hit Clone Code (BAC ID) MVI11
Insertion Classification Genome Hit
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 14.10.2014 10:23