SimpleSearch - Line and FST details
Line specific information
Line ID | 634G02 |
Vector Used | pAC161 |
Line Availability | line died - no seeds available |
Segregation Analysis | unknown |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit F14J22
Sequence (A. th genome BLAST matches underlined) | >15-K023200-022-634-G02-8409 AAATTTCCCGCTAATTCGGNCACTAATTACTTACCCATTACCCATACAAAGGGGTTTAAT TTTCATTTACAATAAAAATAGATTTCTTTGCTATATATTACTCATTAACCTATGGGATCC TCCCTATAGTGAGACCNAGGAATCCCCCCCCTAAAAAGGCTGCGGACATCTACATTTGCG GATTTGGACGT |
GenBank Accession | FR813722 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:18388116 - go to primer design |
BLAST e Value | 1e-33 |
Hit Clone Code (BAC ID) | F14J22 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | FR813720 [GenBank] |
Gene hit At1g29790
Sequence (A. th genome BLAST matches underlined) | >15-K022918-022-634-G02-8409 NGCGTGATTCCGGACTGAACCATTTACATTGAATATATCCTGTATACCGTGTGAAGAAAA GTTTCCTAAGAACAGAGTATATGTCTAAGCGCCTATACCAAACCAGTCATTGAGAACTTC CTATTGAGACATTGCAGAAACCAGCTTCCCAACCCATAACAGGGTAATGCTTTATACTAA CCTACATGGCTTTGATTGACTAGAACC |
GenBank Accession | FR813721 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:10431521 - go to primer design |
BLAST e Value | 4e-40 |
Hit Clone Code (BAC ID) | F1N18 |
Hit Gene Code | At1g29790 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Gene hit At4g39140
Sequence (A. th genome BLAST matches underlined) | >15-K022366-022-634-G02-8409 ACACACCTATAGGAACCTGACGGCGTGAAGTAAACCGTCAGAAAAGACTTGTATTCGTCT CTTTCCCTCTCTTCGCTCTCTCTCTCTCTCTCTAAAGGAGGAAAGAACAAAGCAGTGCTC TCGTATCATTTTTCACCCTTTCGCAATCTAACAGACCCATCGATCGCTCTCTCTCTGTGA AACTATCATCTTCCTCTTCTCCGGAGACGTTTTGGAAGTTCTGGGAGCAGGTTCGATGTT CGTGACTCTCTTAGCATCTATGGGATCCTCCCTATAGTGAGA |
GenBank Accession | FR813719 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:18232115 - go to primer design |
BLAST e Value | 5e-73 |
Hit Clone Code (BAC ID) | T22F8 |
Hit Gene Code | At4g39140 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | RING/U-box superfamily protein |
Insertion Classification | Promoter |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | FR813719 [GenBank] |
Last Updated on 10.06.2021 13:37 |