SimpleSearch - Line and FST details


Line specific information

 
Line ID 634G02
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F14J22

 
Sequence (A. th genome BLAST matches underlined)
>15-K023200-022-634-G02-8409
AAATTTCCCGCTAATTCGGNCACTAATTACTTACCCATTACCCATACAAAGGGGTTTAAT
TTTCATTTACAATAAAAATAGATTTCTTTGCTATATATTACTCATTAACCTATGGGATCC
TCCCTATAGTGAGACCNAGGAATCCCCCCCCTAAAAAGGCTGCGGACATCTACATTTGCG
GATTTGGACGT
GenBank Accession FR813722 [GenBank]
Graphic View Graphic view of sequence FR813722 of line 634G02
Predicted Position of Insertion Chr1:18388116 - go to primer design
BLAST e Value 1e-33
Hit Clone Code (BAC ID) F14J22
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit FR813720 [GenBank]

Gene hit At1g29790

 
Sequence (A. th genome BLAST matches underlined)
>15-K022918-022-634-G02-8409
NGCGTGATTCCGGACTGAACCATTTACATTGAATATATCCTGTATACCGTGTGAAGAAAA
GTTTCCTAAGAACAGAGTATATGTCTAAGCGCCTATACCAAACCAGTCATTGAGAACTTC
CTATTGAGACATTGCAGAAACCAGCTTCCCAACCCATAACAGGGTAATGCTTTATACTAA
CCTACATGGCTTTGATTGACTAGAACC
GenBank Accession FR813721 [GenBank]
Graphic View Graphic view of gene At1g29790
Predicted Position of Insertion Chr1:10431521 - go to primer design
BLAST e Value 4e-40
Hit Clone Code (BAC ID) F1N18
Hit Gene Code At1g29790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At4g39140

 
Sequence (A. th genome BLAST matches underlined)
>15-K022366-022-634-G02-8409
ACACACCTATAGGAACCTGACGGCGTGAAGTAAACCGTCAGAAAAGACTTGTATTCGTCT
CTTTCCCTCTCTTCGCTCTCTCTCTCTCTCTCTAAAGGAGGAAAGAACAAAGCAGTGCTC
TCGTATCATTTTTCACCCTTTCGCAATCTAACAGACCCATCGATCGCTCTCTCTCTGTGA
AACTATCATCTTCCTCTTCTCCGGAGACGTTTTGGAAGTTCTGGGAGCAGGTTCGATGTT
CGTGACTCTCTTAGCATCTATGGGATCCTCCCTATAGTGAGA
GenBank Accession FR813719 [GenBank]
Graphic View Graphic view of gene At4g39140
Predicted Position of Insertion Chr4:18232115 - go to primer design
BLAST e Value 5e-73
Hit Clone Code (BAC ID) T22F8
Hit Gene Code At4g39140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification Promoter
Confirmation Status unknown
Other FSTs Supporting this Hit FR813719 [GenBank]


Last Updated on 10.06.2021 13:37