SimpleSearch - Line and FST details


Line specific information

 
Line ID 676E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N464858)
Segregation Analysis 50:49:31
Confirmed for Hit At1g22020
Parent of DUPLO pair none
Parent of pair(s) 9491

Gene hit F2E2

 
Sequence (A. th genome BLAST matches underlined) 
>77-K022971-022-676-E10-8409
CTACAGTAATGGGAAATGGCACTTTTGGTATGGGATCCTTCTTATAGTGAGANCNNTATA
CTGATTCCCCGAATAACATCTANCTCCAAGCATTCCTTCAAAGTATGNNATCCTCCCTAT
AATCATCCNTATTACTCAAAAAATCTTAAATATTAATATTCTCATAACACATCCTCCCCA
CCCTCCCCCCA
GenBank Accession BX661550 [GenBank]
Graphic View Graphic view of sequence BX661550 of line 676E10
Predicted Position of Insertion Chr1:7758122 - go to primer design
BLAST e Value 9e-07
Hit Clone Code (BAC ID) F2E2
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g22020

 
Sequence (A. th genome BLAST matches underlined) 
>77-K023001-022-676-E10-8409
ACTCCCCATTTCTCATGATTTAGTCCAAAGCTGCAAGCGCACGCTCTTGGCAAAGAATCT
CAATCTGATCAATATACTGATTCCCCGTATAGTATCTAGCTCCAGGCATTCCTTCAGAGT
ATGGGATCCTCCCTATAGTGAGACNNAT
GenBank Accession BX661551 [GenBank]
Graphic View Graphic view of gene At1g22020
Predicted Position of Insertion Chr1:7755284 - go to primer design
BLAST e Value 5e-58
Hit Clone Code (BAC ID) F2E2
Hit Gene Code At1g22020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine hydroxymethyltransferase 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37