SimpleSearch - Line and FST details


Line specific information

 
Line ID 708G11
Vector Used pGABI1
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g49730

 
Sequence (A. th genome BLAST matches underlined) 
>87-K022965-022-708-G11-8409
ATCCATTTACATTGAAATATCCTGCAATTGAATATTCGGATAGGCCGAGAATTATTTTGA
GAATTTTAGAGGTGATTCCCGGATCTTTGGTCCATCGACTACTATGGGATTCTCCCTATA
GTGAGAAGATGACCTACGATCCCTCAACCTTTTTACTACGGAAAAGAAGCCTCTATTTCA
TGCTGCGATAATGGCCAGACGTCCGCCCTTTATTGGCCCATAGGCGCTAGTTTTTTTTTC
CTGGGGAACCTGATTATTACAATTACCCAACGTATGTGCTAACTCTTTCATGCATTTGCC
CCCTCCCTGAGTACTATTAGTATTACACACCAAGCTATTCTTCTTCTCCTATGGTACAAA
AAGACGCTTCCGCCTCTGCTACCCGACCCCTTACCATCGATGCCCCCCTCCAAAAACAAA
TACCTATCCTCGGACGCTTCTTATATCCCCCACCCCTATTATAACCTGCCCTCCCGTGCA
ACTGCTCTGTCACCCCTCCCGCGCATCTACCCTCTCCACCCAACTTCCCTC
GenBank Accession BX662813 [GenBank]
Graphic View Graphic view of gene At1g49730
Predicted Position of Insertion Chr1:18402745 - go to primer design
BLAST e Value 6e-08
Hit Clone Code (BAC ID) F14J22
Hit Gene Code At1g49730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 541F11

Gene hit At2g24130

 
Sequence (A. th genome BLAST matches underlined) 
>87-K022874-022-708-G11-8409
NNNGGCCGTTATCTCCGGACATGAAGCCATTTACAATTGAATATATCCCTCATAGTATAT
ACTCCTCCCCTATAAGAGAGACAGTATCTCTTTTATAGTTTGTGCCTAACTAACGTTTGA
AGAAAATGAAACGTTTAGCGCCTATGATGTTTGACTTATAAAGACAACCAACGTTGTGTG
AACGCGTGTGTAACTTGACTCCGCCACGCCATTTATTCATTTATAATTGCC
GenBank Accession BX662812 [GenBank]
Graphic View Graphic view of gene At2g24130
Predicted Position of Insertion Chr2:10258065 - go to primer design
BLAST e Value 9e-75
Hit Clone Code (BAC ID) F27D4
Hit Gene Code At2g24130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich receptor-like protein kinase family protein
Insertion Classification 5' region
Confirmation Status unknown
Other FSTs Supporting this Hit BX662814 [GenBank]


Last Updated on 10.06.2021 13:37