SimpleSearch - Line and FST details


Line specific information

 
Line ID 728A06
Vector Used pGABI1
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g53270

 
Sequence (A. th genome BLAST matches underlined)
>41-K025113-022-728-A06-8409
AGCCATTTACATTGATACAGTTAGATAAATTTATATGAAATTAAACATTTGTTGTTTTTC
TTGTATTTTTTAATTTCTAATGAAATTGGTTGACCAAAAAAAATATCTAAGAAATTAAGA
TATGTAGTTGGTTCTTTTTTTTTTTTTTTTTAAAGGGGGTTTGAAATTGGGAAAAAGGAG
GGGGACCCCCCCAAAGGGGGGGANNNNNGGGGNNTTCCCCCCTAAAAGNNNNNNNNNNNN
NTTNTTNNNTNNTNTNNNTNTTTTTNTTTTTTTTTTTTTTTTTTTTTTGTNTTTNTTTTG
TTTGGGGGGTGTGGGGTGAGAATAAAGAGGGCGACGAAGGAAGGAAATAAGGTAATGAAA
ATG
GenBank Accession BX945605 [GenBank]
Graphic View Graphic view of gene At1g53270
Predicted Position of Insertion Chr1:19862565 - go to primer design
BLAST e Value 1e-49
Hit Clone Code (BAC ID) F12M16
Hit Gene Code At1g53270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC-2 type transporter family protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit MHM17

 
Sequence (A. th genome BLAST matches underlined)
>41-K025219-022-728-A06-8409
TCGGAATGAGCCATTTACATTGAATATTACCCTAATTCCCAATTGAATACATGTAATGAT
TTCAATTCGTGGGCACATTTTGTTATATTCGTATCTCTTTGTATTTAATTAAATAAGTAT
GGGATCCTCCCTATAGTGAGGCTTTTTTTTTTTTTTTT
GenBank Accession CR358489 [GenBank]
Graphic View Graphic view of sequence CR358489 of line 728A06
Predicted Position of Insertion Chr5:23051484 - go to primer design
BLAST e Value 5e-30
Hit Clone Code (BAC ID) MHM17
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37