SimpleSearch - Line and FST details
Line specific information
| Line ID | 796F03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N476383) |
| Segregation Analysis | 50:50:33 |
| Confirmed for Hit | At1g53210 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g53210
| Sequence (A. th genome BLAST matches underlined) | >22-K025020-022-796-F03-8409 AGCCATTTAAATTGAATATATCCTGCAAATGGCTTCAATGAAGAAAGACGGAATCCCTGT GGCTGCGGAGAAGTTGTTAACAGTGTCGACTAAAGGATCAGCAAATGCAGCTGCAATGGC AGCTCCTAACAGTAGCAGCAGAGCTGCTTTAATGGTGATCCATTTTGGGTCTGCAACCTC ACCGCCTTCCTCATCATTCTCACCATTCTCGTTATCTCCCAACAAAGCATGCTCTCTCTT TGTTTGCTGCAAAACAAGAAAAAGGATAAAACTAATTGCGTTAGATTCCAGATAAGTTTT GTGACCCAAGTCTGTTCAAATAAGGTTTCAACAGTCTTTCTAACCACATGGAAATTGTCA AGGAATTTCATTGTTCGAGGGCCAGCTTCAGGACCAGATGGAGCACCTCCCATTGCCTGG ATAAGCCATTGCTTAATTCCACGGACAATCTCTTCTTGATCAACTTGCTCATCAAGAGTC TTATCAAAATCTTGGAGAACTTTTCCCACAGCATCATCCTTGTCAAAATCTATATCCTCA AAGCTGATCCCAATGATAAG |
| GenBank Accession | BX949169 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19847095 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F12M16 |
| Hit Gene Code | At1g53210 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | sodium/calcium exchanger family protein / calcium-binding EF hand family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g62620
| Sequence (A. th genome BLAST matches underlined) | >22-K024950-022-796-F03-8409 ACGAAGCGGGAACGACAATCTGATCCGCCGGGTACCCTGTCCTCTCCAAATGAAATGAAC TTCCTTATATAGAGGAAGGGTCTTGCGAAGGATAGTGGGATTGTGCGTCATCCCTTACGT CAGTGGAGATATCACATCAATCCACTTGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTT CCACGATGCTCCTCGTGGGTGGGGGTCCAACTGTGGGGGGGGGGTCGGAAGAGGCTTCTT CAACTATGTACTTTCCTTTATGGAAATGATGGAATTTGAAAGAAGCAACTTTATTCTCGA ATATCTTTCACGATAAAGTGAGATATATCGGGGAAAATGATGCCTAGCAGGGCTAACATA GAGAAGGCTTTGATGTACAAGCACTAATGCCGTTTGAAGATGCAATACGAGAGGAACTTA AATTCGTTACTAAGGTGGGGGAAGGAAGTAAACAA |
| GenBank Accession | FR815954 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:25139701 - go to primer design |
| BLAST e Value | 0.001 |
| Hit Clone Code (BAC ID) | K19B1 |
| Hit Gene Code | At5g62620 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Galactosyltransferase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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