SimpleSearch - Line and FST details
Line specific information
Line ID | 797B09 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N476437) |
Segregation Analysis | 50:43:39 |
Confirmed for Hit | At4g20140 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g20140
Sequence (A. th genome BLAST matches underlined) | >66-K024971-022-797-B09-8409 CGTATGACCTTACATGAACGACATTTATCTTTAGGAAGTTATTTTCGTTACGACTATTAT GGTTCTACCAGCCTTGAGTTCAAACATGCCTTTTTGAGTTTCTCCATTCGATATCACGTG TACGACTCTGTCCAAATCACCTGATTTATCAGAAAATATCCAAATTTTGGATTCCAGAAA GCCTAGAACCCACCAATTTGAGCTCGTGACCCACTACGGGATCCTCCCTAAACTGAGACA AAATTGTTATTGAGATCGATGTGTGTCAGTTTCTTGCACAAGACGAGCTGTAGCGGAATG GTTCCTGTGAGAGCGTTGCTTGACATATCTAACAAGGACAGCTCGCGGATTTTCCCCAAC GTCCAAGGGATTTTTCCTGTCAATTGATTCTTGCCTAACCTGAGACGATCAAGATTTTGA GAGTTTCCTATGGGACCCTCCCTAGAGCGAGCCCAA |
GenBank Accession | BX949232 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:10886431 - go to primer design |
BLAST e Value | 5e-104 |
Hit Clone Code (BAC ID) | F1C12 |
Hit Gene Code | At4g20140 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Leucine-rich repeat transmembrane protein kinase |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Gene hit MOB24
Sequence (A. th genome BLAST matches underlined) | >66-K024951-022-797-B09-8409 TTTACAATTGAAATTGGTAATTACTCTTTCTTTTTGATAACACAGAGATATGGAGTCTGT CTATTTTTATCTATGACGTCTATCAGTTTAATATTCGATCCCGATTATCATAATTGCATT GTTTTTTTTTTTCCCAACCAAAAAAAAACCCCAGGGTTTTGCTCTTTGCCAGCAACAAAT TGATTTTAAAAAAAAGTAAAAATTTGAAACCGACCTACCAAAGGGGGAAAAAAACTTTCC CAACGCCACTATTCTGATTCGGGAAAAAAAATACCACCTAGGGGACCCCCCCAAAAGGGG GGCTTTGAGAACACCGACATACAGAATGTGTGATGAAGGAGAGTATAGGAGAACCGCGAG GCTATACGGGAGAGGAATACGCACAGAGAAATACGAAAAAAGTTGTATAGAAAAAGAACG AGGAAAAGTACGAAGAACCATAGGAAGCAATCAGAAAGATA |
GenBank Accession | BX949231 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:8926610 - go to primer design |
BLAST e Value | 3e-40 |
Hit Clone Code (BAC ID) | MOB24 |
Insertion Classification | Genome Hit |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |