SimpleSearch - Line and FST details


Line specific information

 
Line ID 831F05
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F6F3

 
Sequence (A. th genome BLAST matches underlined) 
>38-K025705-022-831-F05-8409
GAAGCCATTTACAATTGAATATATCCTGATATATTGGATATTGTGTTTAAACGAGACTAC
ATGCATACTTTGGTTCCTATTTAGTATAATCCAGCATTCTTTTTCTTGAATGCCAAAAAA
CACACAACGCAAAGTCGCAAACAAGCCACATAATTTGATAATTTTAACTGACAGGAATAC
ATCCGTAGAGCGATTTTCTTAACGGTTGTTTCCTAAAACATTTGAAGTTCGACCTAAATT
GACCACGTGGAAACACATGGAAATTGTGAACTCAATTCATTTTCCAGAATATATATATGA
TTGGTATGAATATACGTGTTTAAGAACTGAACCATATATATGTTTCGTCCAAAAAAGAAG
CATCCGTATACGTATGGGATCCTCCCTATAGTGAGNNNNNNNNNNNNNNN
GenBank Accession CR400195 [GenBank]
Graphic View Graphic view of sequence CR400195 of line 831F05
Predicted Position of Insertion Chr1:103626 - go to primer design
BLAST e Value 7e-174
Hit Clone Code (BAC ID) F6F3
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g77520

 
Sequence (A. th genome BLAST matches underlined) 
>38-K025746-022-831-F05-8409
GNAGCCATTTACATTGAATATATCCTGACGCCGCGGCCACTGTTGCAACCCGATGGAACT
TGCATGATTGGGTTCCCTACTTAATAGAATCCAGTTATGCTTTATCTTGACTGCCGAAAA
ATGAACCATGCGCAGTTTCCCCCCAGCACGATAATTTAATAATTTTAACAGAGAGGAATA
TGTCACTATAGCGATTTATCTATCGGATGTTTCCGCGAAAAATTCAATCTATACCTAAAA
TGACCCCATGCACCCACCAGGAACTTGACACCACCATTCATTATTCCAACGATAGTATTG
AATCCTACCTATATGCATGTTTAACAACTGAACCATATATATGTTTCGTCCAAAACATAA
CCTTCCCTATATGTATGGTATCCTCCTTATACTGAGTCTTTATACAATCCTCGTCTCCCC
NATCATGTAGTAGCCACTGTCAATCATTTAACAAAATTTTAATAATTAGCTTTAGAGATA
TAAATTTATCTATTTTCATATATTTATAAACTTACTTTCATAAAGACGGCATCTCCCTTT
GenBank Accession CR400196 [GenBank]
Graphic View Graphic view of gene At1g77520
Predicted Position of Insertion Chr1:29132106 - go to primer design
BLAST e Value 8e-72
Hit Clone Code (BAC ID) T5M16
Hit Gene Code At1g77520 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-methyltransferase family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37