SimpleSearch - Line and FST details


Line specific information

 
Line ID 859B12
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit F14J22

 
Sequence (A. th genome BLAST matches underlined) 
>90-K025971-022-859-B12-8409
AATATACCTGAGATAATCTCACGAAAGTCACGTATGGGATCCTCCCTATAGTGAGACACT
TTGNAAAGGGATCATAATGAATTATTGTGAATCTGAGATATTGAGAATTCTCTTAGATTA
TATTTGTAATTTATTTTTATATTTTTGGTAGGAAATCTAAATGGCATTTTAATTATTTTT
TAGTTTCAGAAGGATTATATGTCTTTTTTTCAAAAACTAATGTTACTATGGTAACAACTC
ATTTGAAATTTGAAAATTGTTATTCAACTTATTTCTTTTTATTTTATGTTTTCGTATGGG
ATCCTCCCTATAGTGAGANCNNGCTGGANNNGGTGGACTATGGAATGAGCTTGGGAAAAG
CACAAATTTTTGGAATTATTGTGTAGTTTCTTATTTAAGCTCGGTTTTAAACTTAATTGT
TTTTACTTCTTCTTTAAAA
GenBank Accession CR402939 [GenBank]
Graphic View Graphic view of sequence CR402939 of line 859B12
Predicted Position of Insertion Chr1:18395156 - go to primer design
BLAST e Value 5e-39
Hit Clone Code (BAC ID) F14J22
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g26120

 
Sequence (A. th genome BLAST matches underlined) 
>90-K025970-022-859-B12-8409
CCGAAACTCTATTTGGAAGCCTCTTTGAGGTTTTACACGACCCCATGACAAAATTACCTG
ATATCTCTCCCCCCTATTCTCTCTAGGCCTTTATTCCCGTATGAGATAACGAAGTAATGT
TGACTTTGTGACCGTCCCACGTTGTGGATGCTGCATGCATGAACTAAATAGAAACTATTT
TAATGTAACTTTACTAGTCATGATGTTTAATGTTTTATTTTAGCTCTAATAAAATTTATG
AATTCTGATGAAATTAATTACAGGAAATAAATCATGCTGGAGCAGGTGGACTATGGGCTG
AACTTGTTAGCAATAGAGGTTTTTGTGATTTTATCTTGAAGTTTTCTATAAGGCTTGGGC
GGTAAAAAGAATGGTTAATAAAAATCTTTGGATATA
GenBank Accession CR402938 [GenBank]
Graphic View Graphic view of gene At5g26120
Predicted Position of Insertion Chr5:9125261 - go to primer design
BLAST e Value 2e-112
Hit Clone Code (BAC ID) T1N24
Hit Gene Code At5g26120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha-L-arabinofuranosidase 2
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37