SimpleSearch - Line and FST details
Line specific information
Line ID | 873G07 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N483791) |
Segregation Analysis | 50:36:34 |
Confirmed for Hit | At5g17420 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At4g23370
Sequence (A. th genome BLAST matches underlined) | >55-K026519-022-873-G07-8409 TTGAAATTGAGATATCTAAACTCAAGGCGGGTAAACGAAGATGTGATCCCCGGGTACGGG ATCCTCCCATATACGTGATTCCATACCTGAGGGGGATTCTTCCAGGAACGGCCTTCCGCG TATGGAATCCTCCCGTTGTTGAAATCCTCTATAACGCCCTATCCTTTGAACATCGTACTG GATTAACTTTCCTGGATACCTTCCTCTACTTCCATAGGAACAATTTACGACACTACCTTC CCCACTTTAGCCCCCATAAAAAGAAAAAAAAAAATGTCTGCCATCCTCCCTATATTGACA CTGTTATTGGCATCCATCTTCTCTTTGCTTTTTTTAAAATCTAACCCGTTTATGTCCGCA ACCATATGATCTGACGATTCTACGTAGTCCTTCAGGGATGAACCCATACTCCTTTTCGAC TTCTGAAACTTTTTCTGTATGGAATCCCCCCTATCCCGCCCCACATTATGTAGGCCTCCA TCCACAAAATTTTTTCAATTCAAAAATGTAAATT |
GenBank Accession | CR404860 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:12211179 - go to primer design |
BLAST e Value | 9e-07 |
Hit Clone Code (BAC ID) | F16G20 |
Hit Gene Code | At4g23370 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | carboxyl-terminal peptidase |
Insertion Classification | Promoter |
Confirmation Status | unknown |
Gene hit At5g17420
Sequence (A. th genome BLAST matches underlined) | >55-K026465-022-873-G07-8409 GTATGCCTGCCTTTGTTGAGGGCCTCTAAAATGCCCTTACCTTTGAATATCGTACTGGAG GAACTCTATTGGGTACCCTCCTCTTCTCCTTTTGGAACATTGTATCGACACTACCTCCTC CTCTTTAGCCCGATGAATAGAAAAAAAAAAACGTCTGCCATTGTGCTGATTTGGACAGTG TTATTGGCATCTATCTTCTCTTTGCTTTTTTTAAAATTTGATCCGTTTATGCCCCCAACC ATAGTACCTGACACTTCCAAGTGTGGACTCAAGTGATAAAGCAAAATCTTTTTCGGCTTC TAAAACTTTTTCCGTATGCGATCCTCCCTATAATCAGCCCCACCCGCCACATTCTCCGCG CACNGAATTTTTTCAATTCAAAAATGTAAAT |
GenBank Accession | CR404859 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:5737234 - go to primer design |
BLAST e Value | 1e-24 |
Hit Clone Code (BAC ID) | T10B6 |
Hit Gene Code | At5g17420 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Cellulose synthase family protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |