SimpleSearch - Line and FST details
Line specific information
| Line ID | 928C10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N489026) |
| Segregation Analysis | 50:49:48 |
| Confirmed for Hit | At1g49760 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g49760
| Sequence (A. th genome BLAST matches underlined) | >75-K113942-0022-928-C10-8409 GGTGGTGCAGCTGACCACCTAGCTTCGCTCTCCCTTGGAGACAACTTCCTACCTTGAAAG TTCTTACTTATATCAGAAAGAGCTCATTTTATATACACTGTAAAAGTGTTTATTTTGTTC TTATGCAGAATCAGATACCGAGTTGTTCTTGAAAGTTTGGGATTTTTGAGTTTTTGTTTT GGGCAAGAGTTTTAACATTTTCCTTCTGTGTTGATGATTTTCCTAAGACATTGGGAAATT TTATATCGTTACTCTCACCTTTTTTTACCAACACTGCTCATTTGATACGGTATTGTTTGG CATATGTCGAACCTGCCCGGCCGCTATATTAACCGCTATTTCAGTTGTGCCCTCTACTTG AATCTTTGACTCCTTGGGACCTGTGGATCCTCTTCCTGCCCTGCCGCTAGGGGATCCTCT AACCTGCCCGGCCGCTATNNNNNNNNNTTCNCTGTTGTGGTTTCCTTCCCNTTTCGTTGG GTGGGTTTGGGTCCCCTCCCCCGCCTTTGTTGCCCCGACCCCCTTCTTCGGGTACGGTTT GGCTTGAGACCAAACCCACCGGCCGCTACCTATAANNNNNNGNNGGNTGGGTCGTCCCTC NAATATAAGACCAGCGGTGAAGGGAGATAGAGCACCATACCACGCCCCAAGGGAATAAAA GANNCGNNGGACNGNGCAGNAAAAAAAGANTAAGANNGTTGTGAACNTTTTATATGGGCT GCAGCGGATNTGGNNAATGTTCTGGAAGGGGGANATTCCAAGAGTCAGNNAGAATGATAC GTGAATAGTGANCTTTAGAGAAGGCATTCTGGATGCGATGATTTATGTATATCATTCT |
| GenBank Accession | HE666265 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:18419546 - go to primer design |
| BLAST e Value | 6e-41 |
| Hit Clone Code (BAC ID) | F14J22 |
| Hit Gene Code | At1g49760 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | poly(A) binding protein 8 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | CT954669 [GenBank] |
Gene hit T7I23
| Sequence (A. th genome BLAST matches underlined) | >75-K113943-0022-928-C10-8409 ACATTTTTACACGAAAGAGTTCGATAATATAAAGGTTAGTAAAAAAATAAAAATATTCTT TGTCGTAATTATTTCAAAGGTCATTTTTGAGAAGTCAATAAAACATATGTTTTGTTTTGT TAACAACATGCATTATACCTGTTTGATTGATAACATAATAACGACACTAACCTGCCCGGC CGCTATCNTACTCATTGCTGATCCATGTANATTTCCCGGACATATTCAATTGACACTACC GGCGACAAGAGACATTTTTACAACGAAAGAGTTCGATAATAGAAAGGTTAGTAAAAAAAT AAAAATATTCTTTGTCGTAATTATTTCAAAGGTCGTTTTTGAGAAGTCAATAAAACTATG TTTTGTTTTGTTAACAACATGCATTATACCGTTTGATTGATAACATAATAACGACACTAA CCTGCCCGGC |
| GenBank Accession | HE666266 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:447031 - go to primer design |
| BLAST e Value | 2e-77 |
| Hit Clone Code (BAC ID) | T7I23 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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