Sequences from confirmation amplicon


Sequence 25-K102590-0022-228-E10C-8409 is shown.

Sequence Name 25-K102590-0022-228-E10C-8409
GenBank Accession LN497388 [GenBank]
Line ID 228E10
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>25-K102590-0022-228-E10C-8409
TTACATTGAAATATCATCAAAACAAACAAGAACTTATATCCATATGAAGAATAAACAATA
GGAACTTCTGAAATTACCTCCATGAAGCTCTTGTAGACAGCTAAAAACAACCGAAGAACA
TCAGGGTGATCTTGTTCGACATTAAGTTCCTTAGCTATGATCTCCTTTCCAAAATGCTGA
GAGTAAAACACCAACATTCAGAATTCGAAATTGACATATTCATAGAAATATCAGTGAGAA
TGAGAGCAAACACTACAATACCTTGTAAACAAGACCAGCACTACTGAGCTTAGTGTTGAA
GCCATGTCCAAAAACCTCTTCAAAACCTTTCTGGTGATGATCATAACGGTCATGCTCCGG
ATCATAAACACCTCCAACATCAAGCACTGCATCAAGTTCTGCCAATATCTACATGTACCG
TACAACAACATAGAATCATATCCTCCTCACAATTAACCCAGATTTACATCAAAAACCCCT
AATTCCAAAATTAAGCAGTCAATCTCTAGCTACTAATCAATCTCCTAATACTCATTTCCT
AAGCC

Other confirmation sequences from the same hit.

Sequence Name 26-K102590-0022-228-E10C-OriL
GenBank Accession LN497388 [GenBank]
Line ID 228E10
Sequencing primer gene specific primer, OriL: unknown
Sequence (A. th genome BLAST matches underlined) 
>26-K102590-0022-228-E10C-OriL
GGAATGAGCATTTACAATTGTTAGGTAATTTTTACAGGCAATTGATGCTGTGGACAATGG
AATAAACCGGTATGATACTGATCAGCCTCCACGATATGTGAACAACACACATCTGTCTCC
AAGGGTTGGAAGATTAAATCTGGATTGGATTGACCCTGACCAGTCACAAGAAAAGGAGAA
TGAAGCTTTCCAACGTGCAATGGCTCTAGCTGGAAAAGAGTTCCTCGAAGTAAGATCTCT
TTTATATAACATTATGTGCTTATTAGTTTTTTTATGTCCATTGCAATGGTAGTTTCCTAG
AGACATAACATGTTTCATAAAACAAATGTAAGCTTACACTAGTTTCTTTTATATTGTGTT
GTAGAGTGTTCAGTTCCATGCAAGATCGTGGTTACCGGCTCGATCAATTGTGATGCAGTG
TCTTGAAGAAAGATTCAAGACAGACCCCAGCGGTGAGATCATGATATTGGATAGATTTTG
CCCTGTAAGTGTTTCAATACTCGATTCCTCTTGTCCATGCTATTACTATTTGAGTCTAAA
GATATTAAACTCTGGTTCTCTTGTGAGCAGTGGAAGCTTCATTTGTTCGAGCTTGAGCAA
GAAATGAAGATCGAGCCTCTCATCAAATACGTCATTT

Sequence Name 25-K102591-0022-228-E10C-NE17
GenBank Accession LN497388 [GenBank]
Line ID 228E10
Sequencing primer gene specific primer, NE17: 5'-CTGAAGTAGCTCTGGCTTAGGAAA-3'
Sequence (A. th genome BLAST matches underlined) 
>25-K102591-0022-228-E10C-NE17
AGATTGACTGCTTATTTTGGAATTAGGGGTTTTTGATGTAAATCTGGGTTAATTGTGAGG
AGGATATGATTCTATGTTGTTGTACGGTACATGTAGATATTGGCAGAACTTGATGCAGTG
CTTGATGTTGGAGGTGTTTATGATCCGGAGCATGACCGTTATGATCATCACCAGAAAGGT
TTTGAAGAGGTTTTTGGACATGGCTTCAACACTAAGCTCAGTAGTGCTGGTCTTGTTTAC
AAGGTATTGTAGTGTTTGCTCTCATTCTCACTGATATTTCTATGAATATGTCAATTTCGA
ATTCTGAATGTTGGTGTTTTACTCTCAGCATTTTGGAAAGGAGATCATAGCTAAGGAACT
TAATGTCGAACAAGATCACCCTGATGTTCTTCGGTTGTTTTTAGCTGTCTACAAGAGCTT
CATGGAGGTAATTTCAGAAGTTCCTATTGTTTATTCTTCATATGGATATAAGTTCTTGTT
TGTTTTGATGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAG
CAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAAT
TCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGAC
AAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAA
TCTTTATTTCGACGTGTCTACATTC

Sequence Name 26-K102591-0022-228-E10C-NE18
GenBank Accession LN497388 [GenBank]
Line ID 228E10
Sequencing primer gene specific primer, NE18: 5'-AAAAGGTGTACCTGGTAAATGACG-3'
Sequence (A. th genome BLAST matches underlined) 
>26-K102591-0022-228-E10C-NE18
ATTTCTTGCCAGCTCGAAAAATGAAGCTTCCACTGCTCACAAGAGAACCAGAGTTTAATA
TCTTTAGACTCAAATAGTAATAGCATGGACAAGAGGAATCGAGTATTGAAACACTTACAG
GGCAAAATCTATCCAATATCATGATCTCACCGCTGGGGTCTGTCTTGAATCTTTCTTCAA
GACACTGCATCACAATTGATCGAGCCGGTAACCACGATCTTGCATGGAACTGAACACTCT
ACAACACAATATAAAAGAAACTAGTGTAAGCTTACATTTGTTTTATGAAACATGTTATGT
CTCTAGGAAACTACCATTGCAATGGACATAAAAAAACTAATAAGCACATAATGTTATATA
AAAGAGATCTTACTTCGAGGAACTCTTTTCCAGCTAGAGCCATTGCACGTTGGAAAGCTT
CATTCTCCTTTTCTTGTGACTGGTCAGGGTCAATCCAATCCAGATTTAATCTTCCAACCC
TTGGAGACAGATGTGTGTTGTTCACATATCGTGGAGGCTGATCAGTATCATACCGGTTTA
TTCCATTGTCCACAGCATCAATTGCCTGTAAAAATTACCTAACAATTGTAAATGGCTTCA
TGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAA
GAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAA
TGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAA
TAAACAAATTATTCTAATTCGGAGATCTTTATTTCGACGTGTCTACATTCA


Last Updated on 06.12.2018 16:11