Sequences from confirmation amplicon


Confirmation sequences for line 025B05 and hit At2g23180 are shown.
Line ID 025B05
Locus At2g23180 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:9876460
Primers used for PCR MS41 - 8474, show primer details
   
Sequence Name 32-K019216-022-025-B05C-8409
GenBank Accession LN500387 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>32-K019216-022-025-B05C-8409
TAGATTTCCCGGACATGAAGCCATTTACAATTTCCCGGTCTTAAAGTTACAGTCACTAAG
AGATCTAATTTGCTCTGAATATTATGCATTACTATTGTACTACATTTAGTATGAAAATAA
TTATTAGAATTTTACAAAATACTTGAATAAGAGGGGTAATGTTTACAATAAAATTAATAT
TTACTCTTCTTAGAATACTAGGAGGCTTCCATAGTTTAAGAATAGTCGAATGTTACATTT
CTCTTTAGATTCATCCAAATTTTCTCGAATTCACAACAATCTATATTTTTTTTTTCTTTT
CAATTTTTAATCTTTTGCTCTTATCGCTTCTGCTCCTTGTATATACGAAACAACATTAGT
AACGTTCGATTATACCTACTCTAGCTAACTAAGTAAGGATCATAAGTTTTTGTAAAACAT
TAGTATATAACGTTACTAACTACTCTGTTATATACACCGGGAATCTCCATATAGGGTAAT
ACTAATGTTGACTTATTAGGGTTGACTTTACAACATGTCTTTTCGTTTTGGGGTAAATAC
TAATGTTGACTTATTACACATGTTTATTTGTAATTAGCTGCATGAGACGTTACGAAACAT
ATCTTTAGTGACA
   
Sequence Name 33-K019216-022-025-B05C-MS41
GenBank Accession LN500805 [GenBank]
Sequencing primer gene specific primer, MS41: 5'-GAAATCATTATCCCACCTGTCACT-3'
Sequence (A. th genome BLAST matches underlined)
>33-K019216-022-025-B05C-MS41
GATATGTTTCGTAACGTCTCATGCAGCTAATTACAAATAAACATGTGTAATAAGTCAACA
TTAGTATTTACACCAAAACGAAAAGACATGTTGTAAAGTCAACACTAATAAGTCAACATT
AGTATTACACTATATGGAGATTCACGGTGTATATAACAGAGTAGTTAGTAACGTTATATA
CTAATGTTTTACAAAAACTTATGATCCTTACTTAGTTAGCTAGAGTAGGTATAATCGAAC
GTTACTAATGTTGTTTCGTATATACAAGGAGCAGAAGCGATAAGAGCAAAAGATTAAAAA
TTGAAAAGAAAAAAAAAATATAGATTGTTGTGAATTCGAGAAAATTTGGATGAATCTAAA
GAGAAATGTAACATTCGACTATTCTTAAACTATGGAAGCCTCCTAGTATTCTAAGAAGAG
TAAATATTAATTTTATTGTAAACATTACCCCTCTTATTCAAGTATTTTGTAAAATTCTAA
TAATTATTTTCATACTAAATGTAGTACAATAGTAATGCATAATATTCAGAGCAAATTAGA
TCTCTTAGGGACTGTAACTTTAAAACCGGGAAATTGTAAATGGCTTCATGTCCGGGAAAT
CTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAA
Primers used for PCR FL43 - 3144, show primer details
   
Sequence Name 88-K028756-022-025-B05C-3144
GenBank Accession LN514815 [GenBank]
Sequencing primer T-DNA primer, 35St: 5'-GTGGATTGATGTGATATCTCC-3'
Sequence (A. th genome BLAST matches underlined)
>88-K028756-022-025-B05C-3144
GGGTAACCCGGGGATCAGAATGTCGTTTCCCGCCTTCGGTTTAAACTATCAGAGTTTGCT
TCATGTGAAGAATAATAGAAGGAACTGGCTCGATCTTGTGTCCTTCAACGACCTTTATCT
CATAGTTTTGTATAATTTTCACAGCCACTGTCTTCATCTGTGTCATAGCCACTTCTTTCC
CCAAACAAGTCCTTGGACCGGCATTAAACGATAAGAACTTAAAAGAAGGCACGTGAATCA
ACCTTCCACTCTCTGAAATCCATCTCTCCGGTTTAAATTCCGATGCATCTTCTCCCCAAA
CTGATTTCATTCTCCCTAATGAGTAAAGACAGAACACAATCTTCGAACTCGCATCGACTC
TGTGTCCACTTGGAAGAACGTCGGATTTTGTAGGAGACTTGTGCTGAAATGGAACCGGTG
GATATAGCCTAAGGGCTTCACACAATGCTCCATGTACATACACCAACTTGTTTAACTCTT
GAGCATTGAATGAATCAAAATCATTGGTTCTTGGAGATAGTTGTGTGTTGATTTCTTGAC
GAATCTTGGTTATGGCTTT
   
Sequence Name 89-K028756-022-025-B05C-FL43
GenBank Accession LN514910 [GenBank]
Sequencing primer gene specific primer, FL43: 5'-TCTCTAAGAACCCAAAAGCCATAA-3'
Sequence (A. th genome BLAST matches underlined)
>89-K028756-022-025-B05C-FL43
CTCATTAGGGAGAAACGAAATCAGTTTGGGGTGAAGAAGCATCGGAATTTAAACCGGAGT
GATGGTTTTCAGTGAGTGGAAGGTTGATTCACGTGCCTTCTTTTAAGTTTCTTATCGTTT
AATGCCGGTCCAAGGACTTGTTTGGGGAAAGAAGTGGCTATGACACAGATGAAGACAGTG
GCTGTGAAAATTATACAAAACTATGAGATAAAGGTCGTTGAAGGACACAAGATCGAGCCA
GTTCCTTCTATTATTCTTCACATGAAGCAAACACTGATAGTTTAAACCGAAGGCGGGAAA
CGACAATCTGATCCCCGGGTACCCTGTCCTCTCCAAATGAAATGAACTTCCTTATATAGA
GGAAGGGTCTTGCGAAGGATAGTGGGATTGTGCGTCATCCCTTACGTCAGTGGAGATATC
ACATCAATCCACTTGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTTCCACGATGCTCCT
CGTGGG

Last Updated on 06.12.2018 16:11