Sequences from confirmation amplicon


Confirmation sequences for line 052H08 and hit At5g13750 are shown.
Line ID 052H08
Locus At5g13750 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:4440189
Primers used for PCR RK04 - 8474, show primer details
   
Sequence Name 01-K014431-022-052-H08C-8409
GenBank Accession LN486361 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>01-K014431-022-052-H08C-foo
ACCATGTAGATGAAGGGACAGATGTTGGTTCTGTTCTTGCCTTTTCAGGTGTGTTTCTAC
TTCTTAATTCTAACATATTCAATAGAAATGGATTGTTCTAACCTAAAAACCACTGCTTTC
TAGGCTTTGGTCTCCTTATCTTTCAGCTTTCGCTCTACTCTTACGCAGAGAGGCTTTTAG
GACCTATCATAGTTACACGTATATCTGGGGTAAGCACTATATACTCTGTTGTTCTTACTG
CAAAACCTTGTGTTTTCTTTAGTAGGACAGTTCTAATCTTGTGATTGTTTTTGATACTCA
CAGAGCCTAGCAATGGTCGTCTTATCATGTTACCCACTAATAGCAAAGTTATCTGGTTTA
GCCCTTACCGTGACTGTAACTTCTGCATCCGTAGCAAAGAGTGTTTTAGGTGTAAGTTTC
TGATAACCTTAATAAGAAGAATGTGTAAGTAAGACTTTAGTTTATATTCTCAACATTGTG
TATGTGTGTGTGTGTAGACTTCTGCTATAACTGGATTATTCATCCTTCAAAACAAGGCTG
TGGTAAGTATTTTTACAAAACATTGATTCGTTTTAGTATTTAGTTAGGTGAAGAA
   
Sequence Name 02-K014431-022-052-H08C-RK04
GenBank Accession LN486811 [GenBank]
Sequencing primer gene specific primer, RK04: 5'-TTATTGCCGGTTTCTTCACC-3'
Sequence (A. th genome BLAST matches underlined)
>02-K014431-022-052-H08C-foo
TAAATACTAAAACGAATCAATGTTTTGTAAAAATACTTACCACAGCCTTGTTTTGAAGGA
TGAATAATCCAGTTATAGCAGAAGTCTACACACACACACATACACAATGTTGAGAATATA
AACTAAAGTCTTACTTACACATTCTTCTTATTAAGGTTATCAGAAACTTACACCTAAAAC
ACTCTTTGCTACGGATGCAGAAGTTACAGTCACGGTAAGGGCTAAACCAGATAACTTTGC
TATTAGTGGGTAACATGATAAGACGACCATTGCTAGGCTCTGTGAGTATCAAAAACAATC
ACAAGATTAGAACTGTCCTACTAAAGAAAACACAAGGTTTTGCAGTAAGAACAACAGAGT
ATATAGTGCTTACCCCAGATATACGTGTAACTATGATAGGTCCTAAAAGCCTCTCTGCGT
AAGAGTAGAGCGAAAGCTGAAAGATAAGGAGACCAAAGCCTAGAAAGCAGTGGTTTTTAG
GTTAGAACAATCCATTTCTATTGAATATGTTAGAATTAAGAAGTAGAAACACACCTGAAA
AGGCAAGAACAGAACCAACATCTGTCCCTTCATCTACATGGTAATCAGCAATGAGTATGA
TGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAG
ATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCC
GTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGA

Last Updated on 06.12.2018 16:11