Sequences from confirmation amplicon


Confirmation sequences for line 055H05 and hit At5g15340 are shown.
Line ID 055H05
Locus At5g15340 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:4983733
Primers used for PCR IS45 - 3144, show primer details
   
Sequence Name 19-K022052-022-055-H05C-3144
GenBank Accession LN494577 [GenBank]
Sequencing primer T-DNA primer, 35St: 5'-GTGGATTGATGTGATATCTCC-3'
Sequence (A. th genome BLAST matches underlined)
>19-K022052-022-055-H05C-3144
GACGCACAATCCCACTATCCTTCGCAAGACCCTTCCTCTATATAAGGAAGTTCATTTCAT
CTGACCCAGCAACCCCATGTCCTTGTTGAGCGAAACCCAAATCCTCCAGCTTGGCACACA
CGCCAAACAAACAAACTACAGAAACATCATCAATCTCTACTCTTTTCCTTCTCATTTCCA
CGAAGAGCTTCATCGAATTAACCAACAATCCATACCGAGAAAAAGAGGATAACAAAGTGG
TCCAATCCACATTGTCTTTTTCTGAAAGAGGAATTTCGTCGAACAGTTTCTGGGCAGTAA
CCATTTCACCAGAGGAAGCATAAAACTGAAATAGCGCATTGCTAAGATACGACCTGGGAG
CTTTCTTCAATCCAGAAGTGGTTAAAACGGCGTGCAATTCCTTGCCGGGACGGAGAAACG
AACGGTGAGCGCAATGTCGGAGAAGGAGACGAACTTTTTGGTAGGATAAGCATTTCATAA
GATTAAGCTCGTCCCTTTAGTCCTATAACTGATAGAATCTTAGAGCTATGGCGTTAGATC
TCTGCCTTCGACGGTTCTAACTTCTCGTGAGTTCAATTTTCCCGGGAAACAAACAGAAAA
TCTGGGGCCTTAAACCACTTGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTTCCACGAT
GCTCCTCGTG
   
Sequence Name 20-K022052-022-055-H05C-IS45
GenBank Accession LN495033 [GenBank]
Sequencing primer gene specific primer, IS45: 5'-TAAGAGCCCAGATTTTCTGTTTGT-3'
Sequence (A. th genome BLAST matches underlined)
>20-K022052-022-055-H05C-IS45
CCGGGAAAATTGAACTCACGAGAAGTTAGAACCGTCGAAGGCAGAGATCTAACGCCATAG
CTCTAAGATTCTATCAGTTATAGGACTAAAGGGACGAGCTTAATCTTATGAAATGCTTAT
CCTACCAAAAAGTTCGTCTCCTTCTCCGACATTGCGCTCACCGTTCGTTTCTCCGTCCCG
GCAAGGAATTGCACGCCGTTTTAACCACTTCTGGATTGAAGAAAGCTCCCAGGTCGTATC
TTAGCAATGCGCTATTTCAGTTTTATGCTTCCTCTGGTGAAATGGTTACTGCCCAGAAAC
TGTTCGACGAAATTCCTCTTTCAGAAAAAGACAATGTGGATTGGACCACTTTGTTATCCT
CTTTTTCTCGGTATGGATTGTTGGTTAATTCGATGAAGCTCTTCGTGGAAATGAGAAGGA
AAAGAGTAGAGATTGATGATGTTTCTGTAGTTTGTTTGTTTGGCGTGTGTGCCAAGCTGG
AGGATTTGGGTTTCGCTCAACAAGGACATGGGGTTGCTGGGTCAGATGAAATGAACTTCC
TTATATAGAGGAAGGGTCTTGCGAAGGATAGTGGGATTGTGCGTCATCCCTTACGTCAGT
GGAGATATCACATCAATCCACTTGCTTTGAAGACGTGGTTGGAACGTCTTCTTTTTCCAC
GATGCTCCTCGTGGGTGGG

Last Updated on 06.12.2018 16:11