Sequences from confirmation amplicon


Confirmation sequences for line 071F07 and hit At4g26890 are shown.
Line ID 071F07
Locus At4g26890 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:13513263
Primers used for PCR DL36 - 8474, show primer details
   
Sequence Name 32-K018489-022-071-F07C-DL36
GenBank Accession LN500382 [GenBank]
Sequencing primer gene specific primer, DL36: 5'-GTCAAAGTAGGAATGTTCTGCTCC-3'
Sequence (A. th genome BLAST matches underlined)
>32-K018489-022-071-F07C-DL36
AATCATGTCTATAGAGTAGAACTATCAACTCTCAAGACCGACGAAATTATCAGTGTCGGT
GTATGTGTGTTTTTAGATTTCAGACGGTGAAAGTTGACTAAAGTTATTAGATATCATTTT
ATTTACTTGTTCAAATATGTATTTTGGTGCTTAGTAATTAATTTACGACTATGATTATGT
ACTCCCAGAGAGTCGTCTGCGTTAACATAACGGGGTCTTATGCGGTTTAGGTAAACACAC
ACAAAATTGTATTGACATGACTTCGTGTGTAAATAAATCTTGGACAAAGTACAGTTTTGA
CTTCGTCTATAGTCAATCTTATCTTATAGATTGACGTAACCTCTAACAAGAACACAAAGA
CTTGTGTTTCCAACTTTGAAATATGCAATTTGAATTGTCTTCTAGAGTCCATACAATAGT
GATCGTTAGCACATAACCTAACGCATATGTTGCATTGGAAATATTTAGGTAATGTACTAA
TGTACATAGATTCTTTTATTTTGAAGTTTGAACACATGGACATTGTTTCATCAGACTTGG
TTAGTGAATTTAACATGAGCTTGCAATTTGAAAAACAAATGTTTGTTATTAGTACGAAAC
ATATTCTTTATGGATACATTTTCATCTTCATCAGTACAATAATGAAATGCAATTAAATTT
CCGCAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATA
TGGAGAAAAGAAAGAGTAATTACCATTTTT
   
Sequence Name 34-K018489-022-071-F07C-8409
GenBank Accession LN501225 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>34-K018489-022-071-F07C-8409
CCATGTAGATTTCCCGGACATGAAGCCATTGCGGAAATTTAATTGCATTTCATTATTGTA
CTGATGAAGATGAAAATGTATCCATAAAGAATATGTTTCGTACTAATAACAAACATTTGT
TTTTCAAATTGCAAGCTCATGTTAAATTCACTAACCAAGTCTGATGAAACAATGTCCATG
TGTTCAAACTTCAAAATAAAAGAATCTATGTACATTAGTACATTACCTAAATATTTCCAA
TGCAACATATGCGTTAGGTTATGTGCTAACGATCACTATTGTATGGACTCTAGAAGACAA
TTCAAATTGCATATTTCAAAGTTGGAAACACAAGTCTTTGTGTTCTTGTTAGAGGTTACG
TCAATCTATAAGATAAGATTGACTATAGACGAAGTCAAAACTGTACTTTGTCCAAGATTT
ATTTACACACGAAGTCATGTCAATACAATTTTGTGTGTGTTTACCTAAACCGCATAAGAC
CCCGTTATGTTAACGCAGACGACTCTCTGGGAGTACATAATCATAGTCGTAAATTAATTA
CTAAGCACCAAAATACATATTTGAACAAGTAAATAAAATGATATCTAATAACTTTAGTCA
ACTTTCACCGTCTGAAATCTAAAAACACACAT
Primers used for PCR AL05 - 8474, show primer details
   
Sequence Name 25-K118837-0022-071-F07C-AL05
GenBank Accession LN497677 [GenBank]
Sequencing primer gene specific primer, AL05: 5'-AGGAAGATCAAAAACAGAGATGGA-3'
Sequence (A. th genome BLAST matches underlined)
>25-K118837-0022-071-F07C-AL05
TTCTTGATGACGACGAAGAATCTCAGACAGTGATTGTTTGAAGAACAAGACTTCTTCTCC
AGCACTGTGTTGGATCAACGATTTTGGGATTCATGCGAAAGCTCCAAAAGTCACTTAGTT
TCGATTGATCATGAAGACCCTTTTGCTGAATACTCGGAATCTTTGGATTCACCGGCTGAT
CGGATCGAGAAACTCGCCGGAGATGAGTTTTCAAGCTTACTTGATTGGGATACGGAAGAC
GATGGCGGATGGATTCAAGTGAGAGGCGAGAAACATAAAGAAACCGAGAAACGCGACGGC
GACGAAGACGTGATTTGCGTTGAAGCAACGTCATCGTCGCAAACGATTGAAGAAGTTGAA
GATTGGATTTCGAATCAAGACAGCTTGTTCTCGGAATATTCCTCTGACGACATCATTAAT
AATTTCTACTCTAATGAAAATTACCAATTGTAAATGGCTTCATGTCCGGGAAATCTACAT
GGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTT
TTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTAT
   
Sequence Name 01-K118836-0022-071-F07C-8409
GenBank Accession LN486795 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>01-K118836-0022-071-F07C-8409
GGTAATTTTCATTAGAGTAGAAATTATTAATGATGTCGTCAGAGGAATATTCCGAGAACA
AGCTGTCTTGATTCGAAATCCAATCTTCAACTTCTTCAATCGTTTGCGACGATGACGTTG
CTTCAACGCAAATCACGTCTTCGTCGCCGTCGCGTTTCTCGGTTTCTTTATGTTTCTCGC
CTCTCACTTGAATCCATCCGCCATCGTCTTCCGTATCCCAATCAAGTAAGCTTGAAAACT
CATCTCCGGCGAGTTTCTCGATCCGATCAGCCGGTGAATCCAAAGATTCCGAGTATTCAG
CAAAAGGGTCTTCATGATCAATCGAAACTAAGTGACTTTTGGAGCTTTCGCATGAATCCC
AAAATCGTTGATCCAACACAGTGCTTGGAGAAGAAGTCTTGTTCTTCAAACAATCACTTG
TCTGAGATTCTTCGTCGTCATCAAGAAATGGATGTTTAAGTAATTCTTCCACAGTCCATC
TCTGTTTTGAATCTTCCT

Last Updated on 06.12.2018 16:11