Sequences from confirmation amplicon


Confirmation sequences for line 076B01 and hit At3g55120 are shown.
Line ID 076B01
Locus At3g55120 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:20431493
Primers used for PCR 43pr - 8474, show primer details
   
Sequence Name 25-K115234-0022-076-B01C-43pr
GenBank Accession LN497578 [GenBank]
Sequencing primer gene specific primer, 43pr: 5'-GAAGATCACGAATTTACCTTGGAT-3'
Sequence (A. th genome BLAST matches underlined)
>25-K115234-0022-076-B01C-43pr
ACGTAGTCAGCACACGAAGAAAAAGAAGAAGATAAAGAAGAACAGAGCAAACAAACGAAC
CGGCGCCGCCGAGGAATAATGGATTGGAGGAGGCCGGTGACTTGACGGACGGTACAAACG
TGACGGAGTCTACATGAAGCTTCGTGACGGCGGGGAACGGTGACGGAGAGGCGCAGGCGT
TGGATGAAGACATTGTTGAGTCGGTTGGAATTTCGATTGATAATAATGTTACAGAGCTTT
TCTTGATTGTGTTTTTGGGGCCTTTGGGGTTCAGGATATATTCAATTGTAAATGGCTTCA
TGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAA
GAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCA
   
Sequence Name 01-K115233-0022-076-B01C-8409
GenBank Accession LN486697 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>01-K115233-0022-076-B01C-8409
TTGAATATATCCTGAACCCCAAAGGCCCCAAAAACACAATCAAGAAAAGCTCTGTAACAT
TATTATCAATCGAAATTCCAACCGACTCAACAATGTCTTCATCCAACGCCTGCGCCTCTC
CGTCACCGTTCCCCGCCGTCACGAAGCTTCATGTAGACTCCGTCACGTTTGTACCGTCCG
TCAAGTCACCGGCCTCCTCCAATCCATTATTCCTCGGCGGCGCCGGTTCGTTTGTTTGCT
CTGTTCTTCTTTATCTTCTTCTTTTTCTTCGTGTTGCTGACTACGTTCCGTTTTGCTAAC
TTACGCAGGTGTCCGAGGCCTTGATATCCAAGGTAAATTCNTGATCTT

Last Updated on 06.12.2018 16:11