Sequences from confirmation amplicon


Confirmation sequences for line 078H06 and hit F13F21 are shown.
Line ID 078H06
Locus F13F21 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:18252035
Primers used for PCR IN10 - 8474, show primer details
   
Sequence Name 31-K033706-022-078-H06C-8409
GenBank Accession LN500059 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>31-K033706-022-078-H06C-8409
TCGGACTGAGCCTTTACAATTGAAACTCATTTACAACGGACAGAATTATCAACCCGAGAG
CGGAGAAGAAAAGAGAGAGAAAAAAAGAAAGGGAAGGGACAAAAAAATAAATGGTGACTC
AGGCGACCCACAAGCCCTTCCATGGCTGCTTCTTCTTCTTCCTCTCACCCAGAGACACGA
ATTGAAGAAATTTGAATTCTACCACCAATTTTCTACACTCACATTTATGATTTTCCCGTT
CTTGTTGGATCCTACGAGATTTTGACTCGATCTTCAGAGGCAGATCTGATCGCGAAAATT
TCTTATTTCCAGCTAATTTTCCCGTAACGTTGTTTTTTTTGTTTAATCGGAGATGGAGGC
ACTGACGGAGCTTTGTGACATTATAGCAAAGAAATCCGAAGCA
   
Sequence Name 31-K033706-022-078-H06C-IN10
GenBank Accession LN500060 [GenBank]
Sequencing primer gene specific primer, IN10: 5'-TTGCTTCGGATTCTTTGCTATAAT-3'
Sequence (A. th genome BLAST matches underlined)
>31-K033706-022-078-H06C-IN10
CTCTCCGATAAACAAAAAAACAACGTTACGGGAAAATTAGCTGGAAATAAGAAATTTTCG
CGATCAGATCTGCCTCTGAAGATCGAGTCAAAATCTCGTAGGATCCAACAAGAACGGGAA
AATCATAAATGTGAGTGTAGAAAATTGGTGGTAGAATTCAAATTTCTTCAATTCGTGTCT
CTGGGTGAGAGGAAGAAGAAGAAGCAGCCATGGAAGGGCTTGTGGGTCGCCTGAGTCACC
ATTTATTTTTTTGTCCCTTCCCTTTCTTTTTTTCTCTCTCTTTTCTTCTCCGCTCTCGGG
TTGATAATTCTGTCCGTTGTAAATGAGTATTCAATTGTAAATGGCTTCATGTCCGGGAAA
TCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACC
AATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACAT
TTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTA
TTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCACTCCAAAAGG

Last Updated on 06.12.2018 16:11