Sequences from confirmation amplicon


Confirmation sequences for line 079E01 and hit At1g62170 are shown.
Line ID 079E01
Locus At1g62170 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:22975734
Primers used for PCR MS06 - 8474, show primer details
   
Sequence Name 42-K016672-022-079-E01C-8409
GenBank Accession LN504282 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>42-K016672-022-079-E01C-8409
GTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTTCATCTCAATTCTCTT
TCATTCTTCATCACCCTCTTTTTATTTTCTATCTCATAACTCACCGAAGAAGATTCACAA
ACGACATGAGTGAATCAACATCTCTATGCTCTGAAGGGTACTTAATAGCCCGTGGAGCTC
TTTTCGGAAAGAGAAGTATCGTCGGGAAGCTCCCTAACTGAAGCTCTTGCTTAGCAAACT
CCTTCTGCTCACCGTCAGCTCGGAATTTCGCCACTTTAACTCCTTTTCCCGCAAGTTTCT
CAGCCAATTCGATGTACGATGCTTCCATCGCCTGGCAGAAAGGGCACCAAGGAGCGTAAA
GTACGACCAACCACGCCTCTTTACGGTTCTCTAGCT
   
Sequence Name 46-K016672-022-079-E01C-MS06
GenBank Accession LN505708 [GenBank]
Sequencing primer gene specific primer, MS06: 5'-TGAAGCTAGAGAACCGTAAAGAGG-3'
Sequence (A. th genome BLAST matches underlined)
>46-K016672-022-079-E01C-ms06
GGTTGGTCGTACTTTACGCTCCTTGGTGCCCTTTCTGCCAGGCGATGGAAGCATCGTACA
TCGAATTGGCTGAGAAACTTGCGGGAAAAGGAGTTAAAGTGGCGAAATTCCGAGCTGACG
GTGAGCAGAAGGAGTTTGCTAAGCAAGAGCTTCAGTTAGGGAGCTTCCCGACGATACTTC
TCTTTCCGAAAAGAGCTCCACGGGCTATTAAGTACCCTTCAGAGCATAGAGATGTTGATT
CACTCATGTCGTTTGTGAATCTTCTTCGGTGAGTTATGAGATAGAAAATAAAAAGAGGGT
GATGAAGAATGAAAGAGAATTGAGATGAAGGATATATTCAATTGTAAATGGCTTCATGTC
CGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGT
AATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAA
AGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAA
CAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCA

Last Updated on 06.12.2018 16:11