Sequences from confirmation amplicon


Confirmation sequences for line 085H04 and hit At4g00550 are shown.
Line ID 085H04
Locus At4g00550 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:239312
Primers used for PCR PD07 - 8474, show primer details
   
Sequence Name 33-K027354-022-085-H04C-8409
GenBank Accession LN500856 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>33-K027354-022-085-H04C-8409
AGCATTTACAATTGAATATATCCTGCCACAACAACCCAACTATTTAAATATTTGAGGAAA
AATGCTTTGACACGGCCTTGTTTCTCTCTTTTAACGTATTCCAAGTAGTTAGTGTGTACG
ATTCCTATGACGTAGTTGAACTTAGTTTTCCATTTTTGGCCATGATGAAACCATGTGAGA
TGCTCAGGCTCCTCGAGGACAGCAATGTCTGCCTCTTCATCAGGAATGGCATCAGATATA
TCCCCAACAGGAAGAATACTCCTTTTGTCAATAGCAAACTGCCATAAGATAAATTTGAAT
TGCTAAGGTTGGCACAACACAGTCACAGAGTACTACGTAAAAGAAATGGAAGAATTCAAC
TCTATATCACACGGAAATGAAACAATCGACTCTATGAAAGGAAGCAGTATGTGTTTGGTA
CCCAAAAGAAGATTCTTGAGAGTCATACCTTTCCAGGATAGAAACGTATCTCAAAGGCTA
AACGAAAAGAGACTCTCTCCTCAAGCCACTGGCGGACATAAGCTTCTTGCTCTGACGGGG
AACTAAAAGTGATGCTATTTGGG
   
Sequence Name 34-K027354-022-085-H04C-PD07
GenBank Accession LN501276 [GenBank]
Sequencing primer gene specific primer, PD07: 5'-CAAAAGCTTGTCTACCCAAATAGC-3'
Sequence (A. th genome BLAST matches underlined)
>34-K027354-022-085-H04C-PD07
GAAGCTTATGTCCGCCAGTGGCTTGAGGAGAGAGTCTCTTTTCGTTTAGCCTTTGAGATA
CGTTTCTATCCTGGAAAGGTATGACTCTCAAGAATCTTCTTTTGGGTACCAAACACATAC
TGCTTCCTTTCATAGAGTCGATTGTTTCATTTCCGTGTGATATAGAGTTGAATTCTTCCA
TTTCTTTTACGTAGTACTCTGTGACTGTGTTGTGCCAACCTTAGCAATTCAAATTTATCT
TATGGCAGTTTGCTATTGACAAAAGGAGTATTCTTCCTGTTGGGGATATATCTGATGCCA
TTCCTGATGAAGAGGCAGACATTGCTGTCCTCGAGGAGCCTGAGCATCTCACATGGTTTC
ATCATGGCCAAAAATGGAAAACTAAGTTCAACTACGTCATAGGAATCGTACACACTAACT
ACTTGGAATACGTTAAAAGAGAGAAACAAGGCCGTGTCAAAGCATTTTTCCTCAAATATT
TAAATAGTTGGGTTGTTGTGGCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAA
ATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTAC
CAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACA
TTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATT
ATTCTAATTCGGAAATCTTTATTTCGACGTGTCTA

Last Updated on 06.12.2018 16:11