Sequences from confirmation amplicon


Confirmation sequences for line 088D06 and hit F28O9 are shown.
Line ID 088D06
Locus F28O9 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:21168534
Primers used for PCR 44ab - 8474, show primer details
   
Sequence Name 67-K106151-0022-088-D06C-44ab
GenBank Accession LN511818 [GenBank]
Sequencing primer gene specific primer, 44ab: 5'-TGGAGCTCATATTAGCATGAGAAG-3'
Sequence (A. th genome BLAST matches underlined) 
>67-K106151-0022-088-D06C-44ab
GATTGGCTTATCATTGGTACTTTATTGCTTTTTGTTTTGTATCCAAAAAGCAACAAATGG
TTGCTTGTGTGTGTATATATATAACCTTCTTGTCCAGAACCATATATGATTCTAACCATC
AAACAAAGATAAGAATTGGTGACTATGTGCTATACTCTACAATATCACCATGAATACTTC
AAACTAGACTTTTGATAAATTTTGAAACGGTTATTACCAATAAAACGAAAACCATGAAAC
TCTTGTTTTAATTATCAGATTCGAGAAAGTTGTGTACAAACATAGCTGAGAAGGGATGTC
ATCGTGTCACGTTGATTACATTATGGAGGTATTTTGATATTCAATTGTAAATGGCTTCAT
GTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAG
AGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCC
   
Sequence Name 71-K106152-0022-088-D06C-8409
GenBank Accession LN512562 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined) 
>71-K106152-0022-088-D06C-8409
GCCATTTACAATTGAATATCAAAATACCTCCATAATGTAATCAACGTGACACGATGACAT
CCCTTCTCAGCTATGTTTGTACACAACTTTCTCGAATCTGATAATTAAAACAAGAGTTTC
ATGGTTTTCGTTTTATTGGTAATAACCGTTTCAAAATTTATCAAAAGTCTAGTTTGAAGT
ATTCATGGTGATATTGTAGAGTATAGCACATAGTCACCAATTCTTATCTTTGTTTGATGG
TTAGAATCATATATGGTTCTGGACAAGAAGGTTATATATATACACACACAAGCAACCATT
TGTTGCTTTTTGGATACAAAACAAAAAGCAATTAAAGTACCAATTGATTAAGCCTAAATC
GCATCAATTGATCTTCTCATGCTAAATGAAGCTCC

Last Updated on 06.12.2018 16:11