Sequences from confirmation amplicon


Confirmation sequences for line 088H07 and hit At5g62165 are shown.
Line ID 088H07
Locus At5g62165 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:24966842
Primers used for PCR CH02 - 8474, show primer details
   
Sequence Name 13-K020436-022-088-H07C-8409
GenBank Accession LN491838 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>13-K020436-022-088-H07C-8409
TGTAGATTTCCCGGACATGAAGCCATTTACAATTGAACCATTTACATTTTTGTGGCTTGC
TTCTTGTTTCAATTGCTACAATACGCCCACAAAATAAAATCATAGGATGCAAAAGAAGTA
AAACAGATCAGTATGTAATCTTTGTGACCATCGATCCATCAGTTGTTTTGTGATGTAGTA
ATTGATCTCATAAGATTTGGTTTTGTTGGCCATTGAAAGTCAAAGAATCAATTATTAGGG
ACAATGTCCCACATCGGAAGTTGAGTAGGATCTTAAGTGGTATATATAAGATATGGGTCT
CTCCACCTATTGCCAATTGGTTTTAAGTTGGAAGCCCACAGTCTAATATCAATAGCATGG
AAATCATGTAAAGTTTAAGTTTGATTATTTTTACCAAGGATAAAACCGTGAAAGTCATCA
AGTGAAAAAAAAAGAGTTTGCTAACAAACCTGCAAGTGAATTTGTGAGTCCTG
   
Sequence Name 14-K020436-022-088-H07C-CH02
GenBank Accession LN492307 [GenBank]
Sequencing primer gene specific primer, CH02: 5'-CAATCACGACTCACAAATTCACTT-3'
Sequence (A. th genome BLAST matches underlined)
>14-K020436-022-088-H07C-CH02
GGTTTGTTAGCAAACTCTTTTTTTTTCACTTGATGACTTTCACGGTTTTATCCTTGGTAA
AAATAATCAAACTTAAACTTTACATGATTTCCATGCTATTGATATTAGACTGTGGGCTTC
CAACTTAAAACCAATTGGCAATAGGTGGAGAGACCCATATCTTATATATACCACTTAAGA
TCCTACTCAACTTCCGATGTGGGACATTGTCCCTAATAATTGATTCTTTGACTTTCAATG
GCCAACAAAACCAAATCTTATGAGATCAATTACTACATCACAAAACAACTGATGGATCGA
TGGTCACAAAGATTACATACTGATCTGTTTTACTTCTTTTGCATCCTATGATTTTATTTT
GTGGGCGTATTGTAGCAATTGAAACAAGAAGCAAGCCACAAAAATGTAAATGGTTCAATT
GTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATAT
GGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAG
CGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTA
TAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACA
TTCACCCCCC

Last Updated on 06.12.2018 16:11