Sequences from confirmation amplicon


Confirmation sequences for line 101A02 and hit At1g08460 are shown.
Line ID 101A02
Locus At1g08460 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:2672227
Primers used for PCR IL18 - 8474, show primer details
   
Sequence Name 40-K032520-022-101-A02C-8409
GenBank Accession LN503608 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>40-K032520-022-101-A02C-8409
AAAAAATATATTCTTCGCTCTCATAAAATAAAGAAAATATAATTGAATTTATTTATGATT
CATATTCGTATAAAAAACATTTGGCTACAAGTATCATGTACAAAACATTCGGCTAGATTT
AGTTAGAACAAGATTTGTTATAAATCATAATGGCAATATAAGAGATTAGAGCAAGAAACA
TAGCAATTATTATTTGAGACCAGTTTTGCCCCATTTCTTACGATGATAAACGACTTTGAA
TATTCTTCAGTCCACTCCACACTGCGACGACGACTTGAGAAAAACAACATAGAGAAAAAA
AGAAAAATCCAAACCTTAGGGGCAATATTGTAACTAAACCAAACGACACTGAGTCAACAT
TCTGCTTTGCTATAAAGGCCCAAGCACAATTTTTCAGTAACCATGATGAAGTGAGAAATT
CTG
   
Sequence Name 40-K032520-022-101-A02C-IL18
GenBank Accession LN503609 [GenBank]
Sequencing primer gene specific primer, IL18: 5'-TCAGAATTTCTCACTTCATCATGG-3'
Sequence (A. th genome BLAST matches underlined)
>40-K032520-022-101-A02C-IL18
TGGGCTTATGCAAGCGAATGTTGACTCAGTGTCGTTTGGTTTAGTTACAATATTGCCCCT
AAGGTTTGGATTTTTCTTTTTTTCTCTATGTTGTTTTTCTCAAGTCGTCGTCGCAGTGTG
GAGTGGACTGAAGAATATTCAAAGTCGTTTATCATCGTAAGAAATGGGGCAAAACTGGTC
TCAAATAATAATTGCTATGTTTCTTGCTCTAATCTCTTATATTGCCATTATGATTTATAA
CAAATCTTGTTCTAACTAAATCTAGCCGAATGTTTTGTACATGATACTTGTAGCCAAATG
TTTTTTATACGAATATGAATCATAAATAAATTCAATTATATTTTCTTTATTTTATGAGAG
CGAAGAATATATTTTTTTTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAA
TGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCA
AAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAA
TTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCT
TTATTTCGACGTGTCTACATTCACGTCCCAAATG

Last Updated on 06.12.2018 16:11