Sequences from confirmation amplicon


Confirmation sequences for line 105E10 and hit At2g30420 are shown.
Line ID 105E10
Locus At2g30420 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:12961122
Primers used for PCR IN12 - 8474, show primer details
   
Sequence Name 36-K033542-022-105-E10C-8409
GenBank Accession LN502122 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>36-K033542-022-105-E10C-8409
TTACAATTGAATAATCCTGGATGTATTCTGAAAATTCTGCCTACGACTCTTCATCATATA
ATGTGTTTTTGAATTATAGACGAGCACAAAATTCTGAAAAAACATTTATCAAAATTCAGG
AGTCAACATATATAATGCAGAAATGAAATTTAAAATGTATATATATAAAGACAATAATAT
TCAAGAGCCAATATATTATTCAATCCTTTCACTGTTTTTAAAATCATCACACTTTAAGAA
AAGAAGAAATTTTAGTTTCTGTTAATTATACATTTTATCAGTTTATCAACAACATAAAAC
TTTTTTTGAAATTATACAAGTAAAATACTCATGTCATTGCTTAAATATTGGCATGTCATT
TTTCTCGAAACACGTTCGAAAGTCTAAACTACTCTAGAATCATGTTTACCATAACATAAC
ACTTTATCAGCTTTGATTTGTTACTCTCGCCTGTGNAATTT
   
Sequence Name 36-K033542-022-105-E10C-IN12
GenBank Accession LN502123 [GenBank]
Sequencing primer gene specific primer, IN12: 5'-AAAAATTCACATGGCGAGAGTAAC-3'
Sequence (A. th genome BLAST matches underlined)
>36-K033542-022-105-E10C-IN12
TGATTCTAGAGTAGTTTAGACTTTCGAACGTGTTTCGAGAAAAATGACATGCCAATATTT
AAGCAATGACATGAGTATTTTACTTGTATAATTTCAAAAAAAGTTTTATGTTGTTGATAA
ACTGATAAAATGTATAATTAACAGAAACTAAAATTTCTTCTTTTCTTAAAGTGTGATGAT
TTTAAAAACAGTGAAAGGATTGAATAATATATTGGCTCTTGAATATTATTGTCTTTATAT
ATATACATTTTAAATTTCATTTCTGCATTATATATGTTGACTCCTGAATTTTGATAAATG
TTTTTTCAGAATTTTGTGCTCGTCTATAATTCAAAAACACATTATATGATGAAGAGTCGT
AGGCAGAATTTTCAGAATACATCCAGGATATATTCAATTGTAAATGGCTTCATGTCCGGG
AAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATT
ACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTA
CATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAA
TTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCAC

Last Updated on 06.12.2018 16:11