Sequences from confirmation amplicon


Confirmation sequences for line 107F05 and hit At1g25500 are shown.
Line ID 107F05
Locus At1g25500 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:8956752
Primers used for PCR RK43 - 8474, show primer details
   
Sequence Name 39-K015901-022-107-F05C-8409
GenBank Accession LN503172 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>39-K015901-022-107-F05C-8409
ATCCATGTAGACATTGTGAAAGGAAGTCTACACATGAACAACTCAAATCATCAGAACTAA
AAAGTTGTTGCCATTTGACCATAGGGGTTCAGTCATAGTTCAACCAGTTCAACCTCGGAC
GCACCTGTCTATAACTGAAATAACATACAAGAACTGCAACAGAGATCCAACAGCGAATGC
ACCGCCCCAAAAGAACAGTCTGCACCAGAAACATAGTACACTAACTACAGCTAGATAGGT
TGTTAAGATGTGAACCGAAACTTTCATCATCTCATTGGCGTAAGAGCCAAGCAGCAATGA
CCAAACCCAACTGATAAAGACTCCAATGCCACCAGCAACAGCATAGAGAGGCCAGTAATC
CTCTGTTAGACCTTTATGATTCTCCAAGAACCCTTGAGTGTACCTATCGATGTTTAACCT
ATCTGATATTCTAAACCTATTGAGTCCAAGCACCGCGAGCACAAATCCCAAACAAATCAA
GTGGATCACAAAGATGGCTGACCAGAATACATCATGCCAATGGCGGGACTCACGCACAAC
GGCTCGGTTTCCATCTCCACTCCTTCGACTCCGCTGAAGACTCTGCAAATCAAAATGAAA
ACATTGATTCATTCAAATTACATCATGGACGAGTCTG
   
Sequence Name 40-K015901-022-107-F05C-RK43
GenBank Accession LN503535 [GenBank]
Sequencing primer gene specific primer, RK43: 5'-AGCTTTTTGTAGGTCTCAGACTCG-3'
Sequence (A. th genome BLAST matches underlined)
>40-K015901-022-107-F05C-rk43
ATGTAATTTGAATGAATCAATGTTTTCATTTTGATTTGCAGAGTCTTCAGCGGAGTCGAA
GGAGTGGAGATGGAAACCGAGCCGTTGTGCGTGAGTCCCGCCATTGGCATGATGTATTCT
GGTCAGCCATCTTTGTGATCCACTTGATTTGTTTGGGATTTGTGCTCGCGGTGCTTGGAC
TCAATAGGTTTAGAATATCAGATAGGTTAAACATCGATAGGTACACTCAAGGGTTCTTGG
AGAATCATAAAGGTCTAACAGAGGATTACTGGCCTCTCTATGCTGTTGCTGGTGGCATTG
GAGTCTTTATCAGTTGGGTTTGGTCATTGCTGCTTGGCTCTTACGCCAATGAGATGATGA
AAGTTTCGGTTCACATCTTAACAACCTATCTAGCTGTAGTTAGTGTACTATGTTTCTGGT
GCAGACTGTTCTTTTGGGGCGGTGCATTCGCTGTTGGATCTCTGTTGCAGTTCTTGTATG
TTATTTCAGTTATAGACAGGTGCGTCCGAGGTTGAACTGGTTGAACTATGACTGAACCCC
TATGGTCAAATGGCAACAACTTTTTAGTTCTGATGATTTGAGTTGTTCATGTGTAGACTT
CCTTTCACAATGTCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAA
AGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAA
AT

Last Updated on 06.12.2018 16:11