Sequences from confirmation amplicon


Confirmation sequences for line 108C01 and hit At5g49945 are shown.
Line ID 108C01
Locus At5g49945 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:20319088
Primers used for PCR 47cp - 8474, show primer details
   
Sequence Name 21-K108475-0022-108-C01C-47cp
GenBank Accession LN495693 [GenBank]
Sequencing primer gene specific primer, 47cp: 5'-AATGTGTATTCGCTGGGGATATAG-3'
Sequence (A. th genome BLAST matches underlined)
>21-K108475-0022-108-C01C-47cp
GACTGGTAGTCCAGAATTTGGCAGTTCCATATCAGCTCATTTCTGAGTTCAGTCTGATTT
GGAGACTTTTGTAGTGTACTTGAATGGATCTTATTGTTTTCGAGTGAGTGTAAGATATGT
TGAAGGAAGCGTTAGTGTCTTTAAGCATTCAGTAATGGAGTTAGTTAGGATATGGTAATC
AGCTGGCTTGAATTCTATGTCTGTGTCTCTGTTTGTATCTCTATGTGGTTAAATAGGGAA
ATCAATCACGTCCAAATCTCCAATGGGAACCTTAGTTTAACATTTTAGATTTGGCTTAAC
GTTGCACATTCTCTATCTCTATGATACTATCAGTAACCAAACTCAGGCGTGTAGGTTTTT
GGTGACAAGGCTGTGGATAAGTATGGGAAGAATTTCATGTCGATGCATATATCTGACCAA
CACCCTGGCAAGCACAAGAAGATGATGCTTTTCAAGTTTTCTTTACCTGATGCTAAACAT
ATGGATGATATTGTCCGGTTGGTGGCGCTAATTCCATATTACATCGACTTAGATGGCTTC
ATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAA
AGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTA
   
Sequence Name 05-K108474-0022-108-C01C-8409
GenBank Accession LN488388 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>05-K108474-0022-108-C01C-8409
TCGGACATGAGCCATCTAGTCGATGTAATATGGAATTAGCGCCACCAACCGGACAATATC
ATCCATATGTTTAGCATCAGGTAAAGAAAACTTGAAAAGCATCATCTTCTTGTGCTTGCC
AGGGTGTTGGTCAGATATATGCATCGACATGAAATTCTTCCCATACTTATCCACAGCCTT
GTCACCAAAAACCTACACGCCTGAGTTTGGTTACTGATAGTATCATAGAGATAGAGAATG
TGCAACGTTAAGCCAAATCTAAAATGTTAAACTAAGGTTCCCATTGGAGATTTGGACGTG
ATTGATTTCCCTATTTAACCACATAGAGATACAAACAGAGACACAGACATAGAATTCAAG
CCAGCTGATTACCATATCCTAACTAACTCCATTACTGAATGCTTAAAGACACTAACGCTT
CCTTCAACATATCTTACACTCACTCGAAAACAATAAGATCCATTCAAGTACACTACAAAA
GTCTCCAAATCAGACTGAACTCAGAAATGAGCTGATATTGGAACTGCCAAATTCTGTGAC
TACCAGTTCTCACTCTGCTAATAATTGATCCTAGCTCGCTATATCCCCAGCGAATACACA
T

Last Updated on 06.12.2018 16:11