Sequences from confirmation amplicon


Confirmation sequences for line 136D11 and hit At5g11330 are shown.
Line ID 136D11
Locus At5g11330 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:3618449
Primers used for PCR HP85 - 3144, show primer details
   
Sequence Name 10-K033539-022-136-D11C-HP85
GenBank Accession LN490549 [GenBank]
Sequencing primer gene specific primer, HP85: 5'-CTTATCCACCCAGAGGTTTCATTA-3'
Sequence (A. th genome BLAST matches underlined)
>10-K033539-022-136-D11C-HP86
TTACATTTGTGAGCAGAAGAACATTTGATTTGATGAGATGGGGAAGAAGAAAGGGAAAGC
GATCATAGTAGGAGGAAGTATAGCAGGCTTATCTTGCGCACACTCGCTCACGTTAGCATG
CTGGGATGTTTTGGTTCTCGAGAAATCTTCCGAACCTCCTGTTGGGAGTCCTACTGGTGC
TGGGCTCGGACTCGACCCTCAGGCTCGGCAGATCATCAAATCATGGCTTACTACTCCACA
GCTCTTAGATGAAATCACCTTGCCTCTCTCGATTGATCAGGTAATAAGAACACTGAGTTT
AGTTCGACAATTGAAACAATCGGCGTTTAGTTTTTCCAGCTCTACCTAAAGTTTTTAACT
TTTTTTGTGTGTTGTGGGTTTGTTGTAGAATCAGACAACTGATAGTGAGAAGAAAGTGAC
AAGGATTTTAACAAGAGATGAGGATTTTGAGTATGATGGTCAATATGGAGAAAAAGAAAG
AGTAAGATCGAAGGCGGGAAACGACAATCTGATCCCCGGGTACCCTGTCCTCTCCAAATG
AAATGAACTTCCTTATATAGAGGAAGGGTCTTGCGAAGGATAGTGGGATTGTGCGTCATC
CCTTACGTCAGTGGAGATATCACATCAATCCACTTGCTTTGAAGACGTGGTTGGAACGTC
TTCTTTTTCCACGATGCTCCTCGTGGGTGGG
   
Sequence Name 10-K033539-022-136-D11C-3144
GenBank Accession LN490548 [GenBank]
Sequencing primer T-DNA primer, 35St: 5'-GTGGATTGATGTGATATCTCC-3'
Sequence (A. th genome BLAST matches underlined)
>10-K033539-022-136-D11C-3144
TCCACTATCCTTCGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGAC
AGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGATCTTACTCTTTCTTTTTCTCC
ATATTGACCATCATACTCAAAATCCTCATCTCTTGTTAAAATCCTTGTCACTTTCTTCTC
ACTATCAGTTGTCTGATTCTACAACAAACCCACAACACACAAAAAAAGTTAAAAACTTTA
GGTAGAGCTGGAAAAACTAAACGCCGATTGTTTCAATTGTCGAACTAAACTCAGTGTTCT
TATTACCTGATCAATCGAGAGAGGCAAGGTGATTTCATCTAAGAGCTGTGGAGTAGTAAG
CCATGATTTGATGATCTGCCGAGCCTGAGGGTCGAGTCCGAGCCCAGCACCAGTAGGACT
CCCAACAGGAGGTTCGGAAGATTTCTCGAGAACCAAAACATCCCAGCATGCTAACGTGAG
CGAGTGTGCGCAAGATAAGCCTGCTATACTTCCTCCTACTATGATCGCTTTCCCTTTCTT
CTTCCCCATCTCATCAAATCAAATGTTTCTTCTGCTTCACAAATTGTTAACGATAAGAGA
GAGTTTCAACTTAATGAAACCTCT

Last Updated on 06.12.2018 16:11