Sequences from confirmation amplicon


Confirmation sequences for line 142A03 and hit At1g13260 are shown.
Line ID 142A03
Locus At1g13260 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:4541999
Primers used for PCR JE03 - 8474, show primer details
   
Sequence Name 19-K024393-022-142-A03C-8409
GenBank Accession LN494594 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>19-K024393-022-142-A03C-8409
ATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGAAATAGACCCTAATATAGT
AACCTAAATTAAATGCCGTATATTTCATTATGTTTCCACGAAGCTTCCTTTGTGTTCTTT
GAGTTGACCCATACACACCCATCTTACTTCCCATGCACCTGCACATATACTATAATTACT
CCCCTCAAACACGCATTCTTACAAATATATTTTTTGTTATTACCAAATAAAAAGTGAAAC
ATAAAATAATAATATCAGAAGTGACACTTGCTGTTTCTTATTTCCCTCCCCCCAAGCTCT
TTCTCCTTCTTTCTATATATATTATACACACACACGTATACATATACACAACATAATTCA
CAACACAACACAAACACATTTCTGTTTTCTCCATTGTTTCAAACCATAAAAAAAAACACA
GATTAAATGGAATCGAGTAGCGTTGATGAGAGTACTACAAGTACAGGTTC
   
Sequence Name 20-K024393-022-142-A03C-JE03
GenBank Accession LN495048 [GenBank]
Sequencing primer gene specific primer, JE03: 5'-TTTCACAGATGGAACCTGTACTTG-3'
Sequence (A. th genome BLAST matches underlined)
>20-K024393-022-142-A03C-je3
CTACTCTCATCAACGCTACTCGATTCCATTTAATCTGTGTTTTTTTTTATGGTTTGAAAC
AATGGAGAAAACAGAAATGTGTTTGTGTTGTGTTGTGAATTATGTTGTGTATATGTATAC
GTGTGTGTGTATAATATATATAGAAAGAAGGAGAAAGAGCTTGGGGGGAGGGAAATAAGA
AACAGCAAGTGTCACTTCTGATATTATTATTTTATGTTTCACTTTTTATTTGGTAATAAC
AAAAAATATATTTGTAAGAATGCGTGTTTGAGGGGAGTAATTATAGTATATGTGCAGGTG
CATGGGAAGTAAGATGGGTGTGTATGGGTCAACTCAAAGAACACAAAGGAAGCTTCGTGG
AAACATAATGAAATATACGGCATTTAATTTAGGTTACTATATTAGGGTCTATTTCAGGAT
ATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGA
TGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAG
ATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCC
GTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGA
CGTGTCTA

Last Updated on 06.12.2018 16:11