Sequences from confirmation amplicon


Confirmation sequences for line 159A05 and hit At1g77130 are shown.
Line ID 159A05
Locus At1g77130 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr1:28978871
Primers used for PCR AK04 - 8474, show primer details
   
Sequence Name 19-K017118-022-159-A05C-AK04
GenBank Accession LN494547 [GenBank]
Sequencing primer gene specific primer, AK04: 5'-GATTTCTGCTTTTGGGAGAGTATG-3'
Sequence (A. th genome BLAST matches underlined)
>19-K017118-022-159-A05C-AK04
CTCTACCAACAATTCTTCCACCACCACCACTTCATCACCGCCGCATAAAACCGCTCTCCC
TTCCCTGTGAATTCTTTTGGCTTTCTGGTTTGGTACAAATTACTCTGCCTTTCGCCAACC
AAATGTGGGTTGGATATGTTCTTTTGTTTTTTTATTATCAGCTTGAAACCTGTATACGAA
TCCCAGAAACAATGTAATCATGAGGGGATAAAGGAATGAAAGACAAATAAAGAATTTACA
GGAAGATGAAGCTTTGCATTCAAATCTACATGGACAGCAATGAGTATGATGGTCAATATG
GAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGC
GTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTAT
AGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACAT
TCACGTCCCAAT
   
Sequence Name 20-K017118-022-159-A05C-8409
GenBank Accession LN494999 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>20-K017118-022-159-A05C-8409
GTAGATTTGAATGCAAAGCTTCATCTTCCTGTAAATTCTTTATTTGTCTTTCATTCCTTT
ATCCCCTCATGATTACATTGTTTCTGGGATTCGTATACAGGTTTCAAGCTGATAATAAAA
AAACAAAAGAACATATCCAACCCACATTTGGTTGGCGAAAGGCAGAGTAATTTGTACCAA
ACCAGAAAGCCAAAAGAATTCACAGGGAAGGGAGAGCGGTTTTATGCGGCGGTGATGAAG
TGGTGGTGGTGGAAGAATTGTTGGTAGAGTTCGTCTCACCCCAATGCCAAAGCATACTCT
CCCAAAAGCAGAAA

Last Updated on 06.12.2018 16:11