Sequences from confirmation amplicon


Confirmation sequences for line 172F06 and hit At3g45640 are shown.
Line ID 172F06
Locus At3g45640 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:16756730
Primers used for PCR SR02 - 8474, show primer details
   
Sequence Name 07-K024450-022-172-F06C-8409
GenBank Accession LN489093 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>07-K024450-022-172-F06C-8409
GTAGATTTCCCGGACATGAAGCCATTTACATGTAGCTTCGGTTTAAAAAAATTGGTAATT
ACTCTTTCTTTTTCTCCATATGTAGATTTCTTTTTCTTTTTCTTTTTCTTTTTCTCTCTT
CTTCTTCTTCTTCATCTTCTTCCTCGCAATTACCGCGAAAACTCATCTCTGCTCAATCCT
CAATCTCAGTCTCTCTGTTGACTCCGACTGTTATATAAAACCATACAAATACCTTCAGAT
TCACTACTTCAAACCTCAAAGCAACCACTGAATCTCGACTTTGATCAATTGAGAGAGAAA
TGAACACCGGCGGTGGCCAATACACGGATTTTCCGGCGGTGGAAACTCACGGAGGACAGT
TCATAAGTTACGATATCTTCGGTAGTTTATTCGAGATCACATCTAAGTATCGTCCTCCGA
TTATACCAATTGGTCGTGGAGCTTATGGAATCGTTTGGTATGTTTCCTTCTCTGAGCTTT
TTCTTAAGTTTTATTCTTTGAGATCGGAGTTTTTAATTTCTGGATTTTGATTTTGTGAAG
CTCTGTGTTGGATACGGAGACGAACGAGCTAGTAGCGATGAAGAAGATAGCTAATGCTTT
TGATAATCATAT
   
Sequence Name 08-K024450-022-172-F06C-SR02
GenBank Accession LN489557 [GenBank]
Sequencing primer gene specific primer, SR02: 5'-TGAACTGTCTTCTTAGTGGTGGTG-3'
Sequence (A. th genome BLAST matches underlined)
>08-K024450-022-172-F06C-SR02
AACATCTCTTATAGCTATAATCTGTTGCAATACCAAATCAAAAAACCCTAATCATGATTT
ATTTACTAATTTCTACAGATATTTCACAAAATCGAACAAAAACACTAACGTTTTCATGAT
CAAGATGACGAAGAAGCTTGATCTCACGAAGCGTACGCTTAGCATCCATATGATTATCAA
AAGCATTAGCTATCTTCTTCATCGCTACTAGCTCGTTCGTCTCCGTATCCAACACAGAGC
TTCACAAAATCAAAATCCAGAAATTAAAAACTCCGATCTCAAAGAATAAAACTTAAGAAA
AAGCTCAGAGAAGGAAACATACCAAACGATTCCATAAGCTCCACGACCAATTGGTATAAT
CGGAGGACGATACTTAGATGTGNATCTCGAATAAACTACCGAAGATATCGTAACTTATGA
ACTGTCCTCCGTGAGTTTCCACCGCCGGAAAATCCGTGTATTGGCCACCGCCGGTGTTCA
TTTCTCTCTCAATTGATCAAAGTCGAGATTCAGTGGTTGCTTTGAGGTTTGAAGTAGTGA
ATCTGAAGGTATTTGTATGGTTTTATATAACAGTCGGAGTCAACAGAGAGACTGAGATTG
AGGATTGAGCAGAGATGAGTTT

Last Updated on 06.12.2018 16:11