Sequences from confirmation amplicon


Confirmation sequences for line 191H09 and hit At3g61880 are shown.
Line ID 191H09
Locus At3g61880 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr3:22908219
Primers used for PCR NR46 - 8474, show primer details
   
Sequence Name 01-K036415-022-191-H09C-8409
GenBank Accession LN486482 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>01-K036415-022-191-H09C-8409
TGAGCCATTTTCAAATTTTATGTTACAACAAGGAAGCAAGCAAATTCAAACTTGCCCAAG
TGTATCAAGTTAAAAGTACAATATTAAGGTAAGAAGAATGAAATACACACAAAAAATATA
GTGTTTAATATAAAAAACAACATTTCCTTCACTCTTTCAGTTATATAATAATAATACCTA
TTATAAATGAAATATAATATAGTTTTTGAACTAATTACAAAAACTAACAAGAGGGGCTTC
TAATGTTTTTTTCTATATAAATACCTGAAGCCTTTCGTCTTAAACCCCACAGCAAAAAGC
CACTCTCCTTTCTCTCTCTCTCTTGTTCCTCTGCATCCATGGCCACCAAGCTCGACACCA
GTAGCTTACTTTTGGCCCTCTTGTCCAAATGTAGCCTCCTTACTCAAACCAATCTTGCTC
TCTCTCTCCTCGTAGCCTCCCTAGCTTCTCTCGCTCTTTCTATCTTC
   
Sequence Name 09-K036415-022-191-H09C-NR46
GenBank Accession LN490086 [GenBank]
Sequencing primer gene specific primer, NR46: 5'-GAAGAAGAGAGAAAGAGCGAGAGA-3'
Sequence (A. th genome BLAST matches underlined)
>09-K036415-022-191-H09C-NR46
GAGAGCAAGATTGGTTTGAGTAAGGAGGCTACATTTGGACAAGAGGGCCAAAAGTAAGCT
ACTGGTGTCGAGCTTGGTGGCCATGGATGCAGAGGAACAAGAGAGAGAGAGAAAGGAGAG
TGGCTTTTTGCTGTGGGGTTTAAGACGAAAGGCTTCAGGTATTTATATAGAAAAAAACAT
TAGAAGCCCCTCTTGTTAGTTTTTGTAATTAGTTCAAAAACTATATTATATTTCATTTAT
AATAGGTATTATTATTATATAACTGAAAGAGTGAAGGAAATGTTGTTTTTTATATTAAAC
ACTATATTTTTTGTGTGTATTTCATTCTTCTTACCTTAATATTGTACTTTTAACTTGATA
CACTTGGGCAAGTTTGAATTTGCTTGCTTCCTTGTTGTAACATAAAATTTGAAAATGGCT
TCATGTCCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAG
AAAGAGTAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATA
AAATGAAAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAG
CAATAAACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCA

Last Updated on 06.12.2018 16:11