Sequences from confirmation amplicon


Confirmation sequences for line 192C04 and hit T22F11 are shown.
Line ID 192C04
Locus T22F11 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr2:10806129
Primers used for PCR NR51 - 8474, show primer details
   
Sequence Name 75-K102506-0022-192-C04C-8409
GenBank Accession LN513219 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>75-K102506-0022-192-C04C-8409
CATTTACATGAAGAATTGTTCTCTTCCCATCTTTTAATTTTAGCTTTGTCGATCATGTGT
TAATTCCCATTTGTAATTTACTTCTTCTTTGTTTTGTTTTCTAAATTACACAGAAATTTG
AGTTTGATGAAATAAAAAAGAGCTACCGTGCGCTAGTGCTTTTTCCATCATCTAAATTAC
ACTGAGAAAAAGGTTGAAATAAAAAACTAACAATGAAAGAAACCCCAAAGGTGTTACTAC
CTACTAGAAACCCCAAAGGCCTATAGTGTCTCAAAATTCTTAAAAATATCAGATGGAATG
TATTTCAAAACAAACTAATGTCTTTGATGATCCAAGCAGAAATTAAAGAGAATAATAATC
CCTGAAAAAGTTCTCATCAAAGCCTCCAGAAAACAGTT
   
Sequence Name 75-K102507-0022-192-C04C-NR51
GenBank Accession LN513220 [GenBank]
Sequencing primer gene specific primer, NR51: 5'-TAACTGTTTTCTGGAGGCTTTGAT-3'
Sequence (A. th genome BLAST matches underlined)
>75-K102507-0022-192-C04C-NR51
TCTCTTTATTTCTGCTTGGATCATCAAAGACATTAGTTTGTTTTGAAATACATTCCATCT
GATATTTTTAAGAATTTTGAGACACTATAGGCCTTTGGGGTTTCTAGTAGGTAGTAACAC
CTTTGGGGTTTCTTTCATTGTTAGTTTTTTATTTCAACCTTTTTCTCAGTGTAATTTAGA
TGATGGAAAAAGCACTAGCGCACGGTAGCTCTTTTTTATTTCATCAAACTCAAATTTCTG
TGTAATTTAGAAAACAAAACAAAGAAGAAGTAAATTACAAATGGGAATTAACACATGATC
GACAAAGCTAAAATTAAAAGATGGGAAGAGAACAATTCTTCATGTAAATGGCTTCATGTC
CGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGT
AATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAA
AGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAA
CAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACATTCACTC

Last Updated on 06.12.2018 16:11