Sequences from confirmation amplicon


Confirmation sequences for line 194C07 and hit At5g19330 are shown.
Line ID 194C07
Locus At5g19330 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:6512849
Primers used for PCR BD77 - 8474, show primer details
   
Sequence Name 05-K028341-022-194-C07C-8409
GenBank Accession LN488218 [GenBank]
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>05-K028341-022-194-C07C-8409
AATAAAATAAAGGGTTTTTATTTGTGAGTCGAATGAAATAACGAAAATACCCCTGATCTC
TTTTGTGCCTGAGATTGATTTCAAAACGCTGCTTCTTCTTCTTCTCTGATCTCTCCTCTT
CTTCGGATCGTCTTTTACTTTGTGAACGATGGACCAACAACCGGAGAGGCGAGAAGGCCG
GAGTTTTCCGGAGCGTAAAGGACAGAAGCGGAAGCTAGAGGAAGGAGCCGCCGCCGTAGA
AGATCGAGAGATCTCTGCCGTCAGCACCGACGGAGGCCAAGCGCTTCTTAGCGAGGTTGC
TGCTCAAGTCTCGGTACTAAACTCTGCCTTCTCTTGGCAAGAGTCCGATCGCGCTGCTGC
CAAGCGAGCCACTCAAGTTCTGGCTGAGCTAGCCAAAAACGGTGAAAATCAGCTTCCGAT
CTTACTCCTTT
   
Sequence Name 05-K028341-022-194-C07C-BD77
GenBank Accession LN488219 [GenBank]
Sequencing primer gene specific primer, BD77: 5'-AGAAACCGGAGAAAAAGGAGTAAG-3'
Sequence (A. th genome BLAST matches underlined)
>05-K028341-022-194-C07C-BD77
TTTGGCTAGCTCAGCCAGAACTTGAGTGGCTCGCTTGGCAGCAGCGCGATCGGACTCTTG
CCAAGAGAAGGCAGAGTTTAGTACCGAGACTTGAGCAGCAACCTCGCTAAGAAGCGCTTG
GCCTCCGTCGGTGCTGACGGCAGAGATCTCTCGATCTTCTACGGCGGCGGCTCCTTCCTC
TAGCTTCCGCTTCTGTCCTTTACGCTCCGGAAAACTCCGGCCTTCTCGCCTCTCCGGTTG
TTGGTCCATCGTTCACAAAGTAAAAGACGATCCGAAGAAGAGGAGAGATCAGAGAAGAAG
AAGAAGCAGCGTTTTGAAATCAATCTCAGGCACAAAAGAGATCAGGGGTATTTTCGTTAT
TTCATTCGACTCACAAATAAAAACCCTTTATTTTATTTTTAATTGTAAATGGCTTCATGT
CCGGGAAATCTACATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAG
TAATTACCAATTTTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGA
AAGTACATTTTGATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAA
ACAAATTATTCTAATTCGGAAATCTTTATTTCGACGTGTCTACAT

Last Updated on 06.12.2018 16:11