Sequences from confirmation amplicon


Confirmation sequences for line 198D04 and hit At4g38180 are shown.
Line ID 198D04
Locus At4g38180 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr4:17908555
Primers used for PCR UU06 - 8474, show primer details
   
Sequence Name 17-K019175w-022-198-D04C-8409
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer T-DNA primer, 8409: 5'-ATATTGACCATCATACTCATTGC-3'
Sequence (A. th genome BLAST matches underlined)
>17-K019175w-022-198-D04C-840
ATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGTTCAATTTCCAACAATGTC
ATAAAAGAAGACATTACCAACAGACTGATCTTCGCTTCCCTGAACAGAATAAAAGAAGTT
TGGGTTGTCAGCATTCATCTGCCTCAAGTAGTCAAGAAGAAGCTGAATCTCTCCTTCTAT
GCTCTTCTGGCGGTTGTTCCTCATATAATTCCTACAGTCCACTTCGGTGAAACCAACCTT
GCTGATGCCACCATACTCTTTGATGAGGGCGGACATGATTCTGCGGGGACCCATTCCTGC
AGCTTGAAGTGTGTCAATCAAAGTCTTG
   
Sequence Name 18-K019175w-022-198-D04C-UU06
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer gene specific primer, UU06: 5'-CCAAGACTTTGATTGACACACTTC-3'
Sequence (A. th genome BLAST matches underlined)
>18-K019175w-022-198-D04C-UU0
CGAATGGGTCCCCGCAGAATCATGTCCGCCCTCATCAAAGAGTATGGTGGCATCAGCAAG
GTTGGTTTCACCGAAGTGGACTGTAGGAATTATATGAGGAACAACCGCCAGAAGAGCATA
GAAGGAGAGATTCAGCTTCTTCTTGACTACTTGAGGCAGATGAATGCTGACAACCCAAAC
TTCTTTTATTCTGTTCAGGGAAGCGAAGATCAGTCTGTTGGTAATGTCTTCTTTTATGAC
ATTGTTGGAAATTGAACAGGATATATTCAATTGTAAATGGCTTCATGTCCGGGAAATCTA
CATGGATCAGCAATGAGTATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATT
TTTTTTCAATTCAAAAATGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTG
ATAAAACGACAAATTACGATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCT
AATTCGGAAATCTTTATTTCGACGTGTCTACATTCACG

Last Updated on 06.12.2018 16:11